CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.523e-16
Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L++++H ++V LLG C E N   LVYE++ N SL+ +I+ ++ +  L W VR++II  VA GL +LH      I+HRD
Sbjct:  384 EVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRD 465

HSP 2 Score: 41.2022 bits (95), Expect = 3.523e-16
Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PEY R G    KSD+Y+FGV++L++++
Sbjct:  502 VVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMIS 537
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 4.546e-16
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 2 
Query:   95 LQVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ E+L  + H ++   +G C +     L+YEY+ NG+L+DY+  +N +  L W  R  I  + A GL +LH+    PIVHRD
Sbjct:  623 VEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYLSSENAED-LSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRD 704

HSP 2 Score: 46.2098 bits (108), Expect = 4.546e-16
Identity = 18/38 (47.37%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y+DPEY+ T  +  KSD+Y+FG+++L+L+T
Sbjct:  739 TAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELIT 776
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.578e-16
Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L++++H ++V LLG C E +   LVYE++ N SL+ +I+    +  L W +R++II  +A GL +LH      I+HRD
Sbjct:  397 EVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRD 478

HSP 2 Score: 42.3578 bits (98), Expect = 4.578e-16
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            +AGT  YM PEY   G I  KSD+Y+FGV++L++++
Sbjct:  515 IAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 550
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.626e-16
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V  L Q+ HP++VLL+G C   E   LVYE++  GSLE++++ +  +P L W +R ++    A GL FLH +K + +++RD
Sbjct:  140 EVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQP-LTWAIRMKVAVGAAKGLTFLHEAKSQ-VIYRD 219

HSP 2 Score: 41.2022 bits (95), Expect = 4.626e-16
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y  PEY  TG +  KSD+Y+FGV++L+L++
Sbjct:  254 TKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELIS 291
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.644e-16
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIYHQNGK------PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            QV ++S+++H + V LLG C + N   L YE+  NGSL D ++ + G       P L W+ R +I    A GL +LH      I+HRD
Sbjct:  116 QVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRD 203

HSP 2 Score: 46.595 bits (109), Expect = 4.644e-16
Identity = 22/50 (44.00%), Postives = 29/50 (58.00%), Query Frame = 3 
Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            D       T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LLT   P
Sbjct:  230 DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP 279
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.880e-16
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V+ L  IRH ++V  LG C   N   L+Y+Y+ NGSL   ++ + G  +L W +R++I+   A GLA+LH+    PIVHRD
Sbjct:  839 EVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGS-SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRD 919

HSP 2 Score: 39.6614 bits (91), Expect = 5.880e-16
Identity = 19/52 (36.54%), Postives = 33/52 (63.46%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLI 506
            +AG+  Y+ PEY  +  I  KSD+Y++GV++L++LT        +P G+ L+
Sbjct:  956 VAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLV 1007
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 5.897e-16
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEINC--LVYEYLENGSLEDYIY-HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE L  IRH  +V L   C   +C  LVYEY+ NGSL D ++  + G   L W  R +I  + A GL++LH+    PIVHRD
Sbjct:  737 EVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRD 819

HSP 2 Score: 41.5874 bits (96), Expect = 5.897e-16
Identity = 18/40 (45.00%), Postives = 28/40 (70.00%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            +AG+  Y+ PEY  T  +  KSD+Y+FGV++L+L+T   P
Sbjct:  858 IAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQP 897
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.904e-16
Identity = 30/84 (35.71%), Postives = 49/84 (58.33%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYH--QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ VL+++RH H+V LLG C + N   LVYEY+  G+L  +++   + G   L W  R  +  +VA G+ +LH    +  +HRD
Sbjct:  634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRD 717

HSP 2 Score: 46.595 bits (109), Expect = 5.904e-16
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 3 
Query:  360 ETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            ET +AGT  Y+ PEY  TG +  K D+Y+FGVI+++L+T
Sbjct:  750 ETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELIT 788
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.952e-16
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++S I+H ++V LLG   E   + LVYEY+ N SL+ +++ ++    L W  R  II   A GLA+LH   P  I+HRD
Sbjct:  359 EVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRD 440

HSP 2 Score: 41.9726 bits (97), Expect = 5.952e-16
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQL 470
            T +AGTL YM PEY   G +  K+D+Y+FGV++L++
Sbjct:  474 TGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEI 509
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 7.671e-16
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++ H ++V LLG C E     LVYEY+ENG+L D I  +  +P L + +R +I    A G+ +LH     PI HRD
Sbjct:  669 EIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEP-LDFAMRLRIALGSAKGILYLHTEANPPIFHRD 749

HSP 2 Score: 45.4394 bits (106), Expect = 7.671e-16
Identity = 19/46 (41.30%), Postives = 30/46 (65.22%), Query Frame = 3 
Query:  351 EYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            ++  T++ GT  Y+DPEY  T  +  KSD+Y+ GV++L+L T   P
Sbjct:  785 QHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQP 830
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
CRK36_ARATH3.523e-1641.46Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y4291_ARATH4.546e-1636.14Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH4.578e-1637.80Putative cysteine-rich receptor-like protein kinas... [more]
APK2A_ARATH4.626e-1639.02Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2706_ARATH4.644e-1637.50Probable receptor-like protein kinase At2g47060 OS... [more]
RCH2_ARATH5.880e-1641.46Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RLK5_ARATH5.897e-1643.37Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
TMK1_ARATH5.904e-1635.71Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK42_ARATH5.952e-1640.24Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y1684_ARATH7.671e-1641.46Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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