CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.016e-15
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V  L Q+ HP++V L+G C E     LVYE++  GSLE++++ +  +P L W +R ++    A GL FLH++K + +++RD
Sbjct:  137 EVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQP-LTWAIRMKVAIGAAKGLTFLHDAKSQ-VIYRD 216          

HSP 2 Score: 41.9726 bits (97), Expect = 1.016e-15
Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LL+
Sbjct:  251 TQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLS 288          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.295e-15
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++ H ++V LLG C +     LVYEY+ NGSL+D +  +  +P L   +R +I    A G+ +LH     PI+HRD
Sbjct:  675 EIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQP-LSLALRLRIALGSARGILYLHTEADPPIIHRD 755          

HSP 2 Score: 45.8246 bits (107), Expect = 1.295e-15
Identity = 20/53 (37.74%), Postives = 35/53 (66.04%), Query Frame = 3
Query:  330 IETDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            ++ D++T    TI+ GT  Y+DPEY+ +  +  KSD+Y+ G++ L++LT   P
Sbjct:  787 VQRDHVT----TIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRP 835          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.299e-15
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +LS++RH H+V L+G C E N   LVYEY+ NG+L  +++  N  P L W  R +     A GL +LH    + I+HRD
Sbjct:  564 EIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSN-LPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRD 644          

HSP 2 Score: 39.2762 bits (90), Expect = 1.299e-15
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQ 467
            T + G+  Y+DPEY R   +  KSD+Y+FGV++ +
Sbjct:  679 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFE 713          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.320e-15
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   95 LQVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYH-QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++V  LS   HP++V L+G C E +   LVYEY+  GSLED+++   +GK  L W  R +I    A GL +LH+    P+++RD
Sbjct:  147 VEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRD 230          

HSP 2 Score: 41.9726 bits (97), Expect = 1.320e-15
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y  P+Y  TG +  KSD+Y+FGV++L+L+T
Sbjct:  265 TRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELIT 302          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 1.684e-15
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGK-PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++ +LS I+H ++V LLG C E +   LVY ++ NGSL D +Y +  K   L W  R  I    A GLA+LH    + ++HRD +   +  D S
Sbjct:  640 ELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQS 733          

HSP 2 Score: 43.1282 bits (100), Expect = 1.684e-15
Identity = 16/38 (42.11%), Postives = 29/38 (76.32%), Query Frame = 3
Query:  375 GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            GT  Y+DPEY++T  +  KSD+++FGV++L++++   P
Sbjct:  761 GTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREP 798          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.696e-15
Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +L++++H ++V LLG C E     LVYE+++N SL+++I+    +  L W VR+++I  VA GL +LH      I+HRD
Sbjct:  405 EILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRD 486          

HSP 2 Score: 41.5874 bits (96), Expect = 1.696e-15
Identity = 19/49 (38.78%), Postives = 33/49 (67.35%), Query Frame = 3
Query:  333 ETDNITEYRETI-LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            +TD  + +R T  +AGT  YM PEY   G    K+D+++FGV++++++T
Sbjct:  512 DTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIIT 560          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.712e-15
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   38 IICESQVHRYDLP*KFPSNLQVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYH-QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++   Q+ R  L       ++V +LS + HP++V L+G C + +   LVYE++  GSLED+++     K AL W +R +I    A GL FLH+    P+++RD
Sbjct:  111 VVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRD 213          

HSP 2 Score: 42.743 bits (99), Expect = 1.712e-15
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y  PEY  TG +  KSD+Y+FGV+ L+L+T
Sbjct:  248 TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 285          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.190e-15
Identity = 29/84 (34.52%), Postives = 51/84 (60.71%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQ--NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++++LS++ H H++ LLG C + +   LVYE++ +GSL  +++ +  N K  L W  R  I  + A G+ +LH     P++HRD
Sbjct:  551 ELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRD 634          

HSP 2 Score: 47.3654 bits (111), Expect = 2.190e-15
Identity = 19/35 (54.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  372 AGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            AGTL Y+DPEY+R   +  KSD+Y+FGV++L++L+
Sbjct:  672 AGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILS 706          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.211e-15
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+L  I+H ++V L G C  P    L+Y+YL  GSL++ + H+ G+  L W  R  II   A GL++LH+     I+HRD
Sbjct:  350 ELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEAL-HERGEQ-LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRD 429          

HSP 2 Score: 46.2098 bits (108), Expect = 2.211e-15
Identity = 20/48 (41.67%), Postives = 32/48 (66.67%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLI 506
            TI+AGT  Y+ PEY ++G    K+D+Y+FGV++L++L+   P     I
Sbjct:  463 TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI 510          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 62.3882 bits (150), Expect = 2.840e-15
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLG--ACPEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +++ L +IRH H+V LLG  A  + N L+YEY+ NGSL + ++   G   L W  R ++  E A GL +LH+     I+HRD + + +  D
Sbjct:  737 EIQTLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH-LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLD 826          

HSP 2 Score: 40.4318 bits (93), Expect = 2.840e-15
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNG 494
            +AG+  Y+ PEY  T  +  KSD+Y+FGV++L+L+    P G
Sbjct:  854 IAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVG 895          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
APK2B_ARATH1.016e-1537.80Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5374_ARATH1.295e-1539.02Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.299e-1540.24Probable receptor-like protein kinase At1g30570 OS... [more]
RLCK7_ARATH1.320e-1540.48Probable serine/threonine-protein kinase RLCKVII O... [more]
NORK_MEDTR1.684e-1537.23Nodulation receptor kinase OS=Medicago truncatula ... [more]
CRK28_ARATH1.696e-1537.80Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
PBS1_ARATH1.712e-1534.95Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRI4_MAIZE2.190e-1534.52Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
FEI1_ARATH2.211e-1539.02LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH2.840e-1537.36Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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