CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = -1 Query: 394 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPG 702 +N ++ G IVK A PLK IA N G GSV+ EK+ N YG +AATG Y D++ AGIIDP KVVR L++A+S A T L ++C EIKE E +PG Sbjct: 432 ENTDKAWGIKIVKNACKVPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNAASIAGTMLTAECLVAEIKEKEEKLPG 534
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 ++EEK+GADIVKRAL PL+ IA N GV GSV+ +V ++ G NAATG +EDL+AAGIIDP KVVR L++A+S A L ++ VE E + A P M G Sbjct: 432 DEEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKD-SDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKAAAPADAGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV AL PL IA+N G NG+VV+E V SRA + G NAATG+Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISE-GYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18 Identity = 56/122 (45.90%), Postives = 74/122 (60.66%), Query Frame = -1 Query: 334 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY*AN*QGPGG 699 NDE VG +V+RA+ PL+ IA+N GV+G+VV+EKV S A +G NAAT +YEDL+A G+IDP KVVR + +A+S A L ++ E + E A GG P G G G GG Sbjct: 432 NDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAP-TFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMGGMGGMGGMGG 552
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 693 +E++G DIV+RA+ PL++I +N G GS+V EK+ + +G NA T YEDL+ AG+IDP KV R L++A+S A L ++ VE KE +PA P G P Sbjct: 435 DEQIGVDIVRRAIEEPLRMIVQNAGGEGSIVVEKIRTAKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEALIVEKKEDKPAAPAGGP 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 370 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 705 L NDEE+V ADI+ +AL PL +A N GV GSV+ EKV A G N TG EDL+AAGIIDP KVVR L++A+S A L ++ + +++PEPA P M G Sbjct: 433 LSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKV-KEATGNQGYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTE--ALVVEKPEPAAPAMPDMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 ++EEK+GADIVKRAL PL+ IA N G GSV+ +V ++ G NAATG +EDL+AAGIIDP KVVR L++A+S A L ++ VE E + A P M G Sbjct: 432 DEEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKD-SDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKSAAPADAGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_WOLSU (60 kDa chaperonin OS=Wolinella succinogenes GN=groL PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +EK+G +I+KRA+ PLK IA+N G + VV+ V N +G NAA G Y D+ A GIIDP KV R L++A S + L ++ EIKE +PAMP + M G Sbjct: 433 DEKIGYEIIKRAISAPLKQIAQNAGFDAGVVANNVEQNGNENFGFNAANGEYVDMFAEGIIDPLKVARIALQNAVSVSSLLLTTEATISEIKEDKPAMPDMSGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 367 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 699 ND++++G DIV++AL PL+ IA+N G +G+VV+ KVL + +G +A G ++DL+AAGIIDP KVVR L+ A+S + ++ E EP+PA P A+ GY Sbjct: 433 NDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAPPAG--ADLGY 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESOH (60 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groL PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 55/112 (49.11%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVE--IKEPEPAMPGGNPMANSGYG 693 EEK+G +V RA+ PL+ IA N GV GSVV EKV + +G NAATG+Y DL+AAG+IDP KVVR L++A S A L ++ E KE AMPGG G G Sbjct: 434 EEKLGVKVVMRAIEEPLRRIANNAGVEGSVVIEKVKNETG-SFGYNAATGDYGDLIAAGVIDPTKVVRFALQNACSVASVMLTTEAMIAEKPSKEEPAAMPGGGMGGMGGMG 544 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |