CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 DN++E G +I+KRA+ PL+ I N G G+VV +KV +G NA T YE+L AAG++DP KV R LE+A+S A FL ++C VE KE +P MP G P Sbjct: 432 DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKV-REGKGDFGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNSC (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9605) GN=groL2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV AL PL IA+N G NG+VV+E V +RA + G NAA+G Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGANGAVVAENVKARAGAE-GFNAASGEYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 +ND+E G I+KRA+ PL+ I N G G+VV +KV S +G NA T YE++ AAG++DP KV R LE+A+S A FL ++C VE KE +P MP G P Sbjct: 432 ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 +ND+E G I+KRA+ PL+ I N G G+VV +KV S +G NA T YE++ AAG++DP KV R LE+A+S A FL ++C VE KE +P MP G P Sbjct: 432 ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKV-SEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18 Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 ND+++VG DI++RAL PL+ IA N G +G+V++ KVL +++ +G +A G Y++L+ AGIIDP KVVR L+ A+S A + ++ E E + A GG M G Sbjct: 433 NDDQRVGGDIIRRALQAPLRQIAHNAGEDGAVIANKVLENSDYNFGFDAQAGEYKNLVEAGIIDPAKVVRTALQDAASVAGLLITTEAMVAERPEKKAAPAGGPDMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E++GADIV RA+ PLK IA N G + VV+ +V +N G NAATG Y D+ AGI+DP KV R +++A S A L ++ +IKE +PAMP M G Sbjct: 432 DERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDIKEDKPAMPSMPDMGGMG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV AL PL IA+N GVNG+VV+E V +++ ++ G NAA G+Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGVNGAVVAENVKAKSFNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_RHORT (60 kDa chaperonin 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N ++ VG +IV+RAL P++ IA+N GV+G+VV+ K+L ++ +G NA TG YE+L+ AG+IDP KVVR L+ A+S A + ++ EI E + AMP + G G Sbjct: 433 NPDQNVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLENSDTDFGYNAQTGIYENLVTAGVIDPTKVVRAALQGAASIAGLLITTEAMVAEIPEKKDAMPSPDMGGMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_GRABC (60 kDa chaperonin OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 45/111 (40.54%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 DN ++KVG +I++RAL PL+ I++N G +G+V++ KVL + +G +A TG ++DL++AGIIDP KVVR L+ A+S A + ++ + ++PE P G P G Sbjct: 432 DNGDQKVGIEIIRRALQSPLRQISENAGEDGAVIAGKVLENGTYNFGFDAQTGEFKDLVSAGIIDPAKVVRTALQDAASVAALLITTE--AMIAEKPEKKAPAGAPPGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 51/112 (45.54%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE--PEPAMPGGNPMANSG 699 N++E G +IVKRA+ PL+ I +N G G+V++++V + +G NA TG YEDL AG+IDP KV R LE+A+S A L ++C E+KE P PAMP PM G Sbjct: 433 NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRVKEEKDD-FGYNARTGIYEDLYVAGVIDPTKVARVALENAASIAGMLLTTECVITEVKEENPAPAMP---PMGGGG 540 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |