CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PSEPW (60 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 702 DN+++ VG +++RA+ PL+ I N G SVV++KV + + YG NAATG Y D++ GI+DP KV R L+ A+S + ++ ++ E +PA GG P Sbjct: 432 DNEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKV-KQGSGNYGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPA--GGMP 534
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PSEF5 (60 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 DN ++ VG +++RA+ PL+ I N G SVV +KV A + +G NAAT Y D++ GI+DP KV R L+ ASS L ++ EI E +PA G M G Sbjct: 432 DNADQDVGIAVLRRAIEAPLRQIVANSGDEPSVVVDKVKQGAGN-FGYNAATSEYGDMIEMGILDPTKVTRSALQAASSIGGLILTTEAAVAEIVEDKPAAGGMPDMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSG 693 +E G +V RAL P++ IA+N G GSV+ EK L + G NAATG Y D++A GI+DP KV R L++A+S + FL ++ V +PE PAMP M G Sbjct: 434 DEATGVKLVLRALEAPVRQIAENAGEEGSVIVEK-LKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTE--AVIADKPEKDAPAMPDMGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOTE (60 kDa chaperonin OS=Clostridium tetani GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 367 KVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEP-EPAMPGGNPMANSGY 687 K+G DIVK++L P++ IA N GV GS+V EKV + G +A Y +++ AGI+DP KV R L++A+S A TFL ++ +I E + MPG M + Y Sbjct: 437 KLGIDIVKKSLEEPVRQIACNAGVEGSIVIEKV-KHSEAGIGYDALNNEYVNMIKAGIVDPTKVSRSALQNAASVASTFLTTEAAIADIPEKNDTPMPGAPGMMDGMY 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOD6 (60 kDa chaperonin OS=Clostridium difficile (strain 630) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE----PAMPGGNP 693 E K+GA IVK+AL PL+ IA N G+ G+V+ + V++ + + G +A Y +++ AGI+DP KV R L++A+S A TFL ++ ++ E E P M GG P Sbjct: 434 EVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVN-SEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAGMPGMGGGMP 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 702 D + ++G +I+ ++L P++ IA N GV GSV+ EKV + G +A G Y +++ GI+DP KV R L++A+S A TFL ++ +I E MPG M G Sbjct: 430 DVADTQIGINIIVKSLEEPVRQIATNAGVEGSVIIEKV-KNSEPGIGYDALHGEYINMIKGGIVDPTKVTRSALQNAASVASTFLTTEAAVADIPAKETPMPGAPGMGMDG 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLAMS (60 kDa chaperonin OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 693 +E GA+IV+ A+ PLK IA N G+ VV+E+V + + +G NAATG Y D++AAGI DP KV R L +A+S A FL ++ + E PA P G+P Sbjct: 433 DEATGANIVRVAVDAPLKQIALNAGLEPGVVAERVRNLPSG-HGLNAATGEYVDMLAAGINDPVKVTRSALLNAASIAGLFLTTEAVVADKPEKNPA-PAGDP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLAM3 (60 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNP 693 +E GA+IV+ A+ PLK IA N G+ VV+E+V + + +G NAATG Y D++AAGI DP KV R L +A+S A FL ++ + E PA P G+P Sbjct: 433 DEATGANIVRVAVDAPLKQIALNAGLEPGVVAERVRNLPSG-HGLNAATGEYVDMLAAGINDPVKVTRSALLNAASIAGLFLTTEAVVADKPEKNPA-PAGDP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-PAMPGGNPMANSGYG 693 +E G +IV RAL P++ IA N G+ GSVV E+ L G NAATG + +++ +GI+DP KV R L++A+S A FL ++ + EP PAMP M G G Sbjct: 432 DEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_BACCR (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = -1 Query: 364 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-PAMPGGNPMANSGYG 693 +E G +IV RAL P++ IA N G+ GSVV E+ L G NAATG + +++ +GI+DP KV R L++A+S A FL ++ + EP PAMP M G G Sbjct: 432 DEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |