CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 391 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE---PEPAMPGG 705 ++N ++K G DIV+RA+ P + I N G +GSVV K+L + +G NA TG Y D++A+GIIDP KVVR L+ A+S + + ++ VE+ + PAMPGG Sbjct: 431 VENTDQKTGIDIVRRAIQAPARQIVANAGDDGSVVVGKILENETYTFGYNAQTGEYVDMVASGIIDPAKVVRTALQDAASISALIITTEALVVELPKKAAAAPAMPGG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGG 699 ND+++ G +IV+RAL P + IA+N G S+V K+L + YG NA TG Y D++ GIIDP KVVR L+ A+S A + ++ E+ K+ PAMPGG Sbjct: 432 NDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNAQTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV+ +L PL IA+N G NG+VV+E V SR G NAATG+Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G + Y Sbjct: 435 EELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGGMGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = -1 Query: 382 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPM 693 EE +GA+IV +AL PLK IA+N G NGSVV+E V + + G NAA+ Y D++AAGIIDP KV R L++A+S A L ++C V++ E + A P G M Sbjct: 435 EELIGANIVAQALDAPLKRIAENAGANGSVVAENVRHKPFSE-GFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGM 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PELLD (60 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGV-NGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN+++K G DI++RAL PL+ I N G +G+VV E+V + +G NA T YEDL+AAG++DP KV R LE+A+S A L ++ +IKE + MP P G G Sbjct: 432 DNEDQKTGIDIIRRALEEPLRQIVANTGTTDGAVVLERV-KQGEGDFGFNARTEQYEDLVAAGVVDPTKVTRSALENAASVASILLTTEACITDIKEDKSDMPAMPPGGMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 397 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 699 ND+++ G DIV+RAL P + IA N G +G+ + K+L +++ +G NAATG YEDL+ AG+IDP KVVR L+ A+S A + ++ E+ + E A P Sbjct: 433 NDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_RHOPB (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGG 702 DN + + G +IV +AL P++ IA+N GV GS+V K+L + +G +A T Y D++A GI+DP KVVR L+ ASS A + ++C E+ ++ PAMPGG Sbjct: 432 DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTECMVAEMPRDAAPAMPGG 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 702 DN + + G +IV +AL P++ IA+N GV GS+V K+L + +G +A T Y D++A GI+DP KVVR L+ A+S A + ++ E+ +E PAMPGG M G Sbjct: 432 DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAMVAELPREAAPAMPGGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 699 ++ EK G DIV+RAL PL+ IA N G S+V KV + +G NAATG+YEDL+ +G+IDP KV R L++ASS A L + E + E A P G M G Sbjct: 432 SEGEKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAPAGGGMGGMG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = -1 Query: 391 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 699 N EE+VGADIV RAL PL IA N G+ GSVV EKVL + +G +A TG Y D+ A GI+DP KVVR L++A+S A +L ++ + +++PEP G Sbjct: 433 NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEK-EMPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTE--AIVVEKPEPKTKTG 532 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |