CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SORC5 (60 kDa chaperonin 1 OS=Sorangium cellulosum (strain So ce56) GN=groL1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27 Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L R ++ ++++K NDE VG +V+RA+ PL+ IA+NAGV+G+VV+EKV S +GYNAAT +YEDL+A G+IDP KVVR + +A+SVA L ++ +V E + E A G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVVGGGVALFRAAASLESLKF---NDERDVGVRLVRRAVEAPLRQIAQNAGVDGTVVAEKVRSGAP-TFGYNAATDSYEDLLAGGVIDPAKVVRHAISNAASVAALMLTTEALVAEKPKKEKAAAGGAPGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.982e-27 Identity = 65/146 (44.52%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KE+K RV+DALNAT+AA L R + V ++ ND++++G DIV++AL PL+ IA+NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 390 KERKDRVDDALNATRAAVEEGIVPGGGTALARAAEVVARLQ--FHNDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.982e-27 Identity = 68/148 (45.95%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 K++KLR+EDA+NATKAA LL L++ + ++L EEK+GA I+++AL PL+ IA+NAG+ GSV++EKV + + +G+NA T YEDL+AAGIIDP KV R L++A+S+A L ++C+VV+ K + PAG Sbjct: 388 KDRKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSLSG-EEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLE-FNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECIVVD-KPEDDKTPAG 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV----EIKEPEPAMP 440 KEKK R+EDAL+AT+AA TL+R V+ + + LD DE KVGA IV +AL P++ IA+NAG +G+V+ EK+L+S YG++A G Y D+ AGIIDP KV R L++A+S+A L ++ +VV E KE PAMP Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKELDGDE-KVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDMFKAGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKEAAPAMP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 K+KKLR+EDA+NATKAA TL L+ + + EE +GA+IV +AL PLK IA+NAG NGSVV+E V HK G+NAA+ Y D++AAGIIDP KV R L++A+S+A L ++C+VV++ E + A PAG M Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENV----RHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECIVVDLPEKKEAAPAGGGM 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA L+R +D +K +D+E G I++RA+ PL+ IA NAG GS++ EKV + +G+NAATG +EDL+AAG+IDP KV R L++A+SVA L ++C + E KE PA PA M G Sbjct: 390 KEKKDRVEDALNATRAAVEEGIVPGGGTALVRCCKVLDDVKPA--DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKVKEGKD-AFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTECAIAEKPKEDAPAAPAMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L++ S KV+ LD +E++GADIV RA+ PLK IA NAG + VV+ +V S N G+NAATG Y D+ AGI+DP KV R +++A SVA L ++ V +IKE +PAMP+ M G Sbjct: 389 KEKKDRVDDALSATRAAVEEGIVIGGGAALIKASKKVN-----LDLTGDERIGADIVLRAISAPLKQIAINAGFDAGVVANEVEKSSNENLGFNAATGEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVSDIKEDKPAMPSMPDMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 68/158 (43.04%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 K+KKLR+EDA+NATKAA TL L+ + + + EE +GA+IV+ +L PL IA+NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_ANADF (60 kDa chaperonin 2 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL2 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.589e-27 Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LR ++ +K + + EK G DIV+RAL PL+ IA N G S+V KV S + +G+NAATG+YEDL+ +G+IDPTKV R L++ASSVA L + +V E + E A PAG M G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVAYLRAVKALEGVKVS---EGEKFGLDIVRRALEEPLRQIAGNGGYEASIVVNKVKESKDTNFGFNAATGDYEDLVKSGVIDPTKVSRSALQNASSVASLMLTTMALVAEKPKEESAAPAGGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.381e-27 Identity = 68/147 (46.26%), Postives = 99/147 (67.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 +++KLR+EDA NAT AA TL+ LS+ + AIKET ++ + ++GADIV++AL LIA+NAG+ G VV EK++ S+ + GYNA T YE+L+ AG+IDP KV RC L++A+SVA L + +VV+ +P+P PA Sbjct: 432 EDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKALVAQ-SLIAQNAGIEGEVVVEKIMFSE-WELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD--KPKPKAPA 574 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |