CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.767e-27 Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RVEDALNAT+AA LLR ++ IK +N ++++GA+IVK+AL P+K I NAGV +++ EKV + N YGY+A + D+M AGIIDPTKV R L++A+SVA L ++ +V EI E E P +P Sbjct: 390 KEKKARVEDALNATRAAVEEGIVPGGGVALLRCQKALEKIK--FENHDQQLGAEIVKKALEEPIKQIIANAGVEATLIVEKVKENKNINYGYDAYAEKFVDMMEAGIIDPTKVTRTALQNAASVAGLMLTTEVLVAEIPEEEKKPPMPSP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 121.324 bits (303), Expect = 5.767e-27 Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 470 K++KLR+EDA+NATKAA TL L+ +++ DEE GA IV RAL PLK IA+NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 388 KDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEDWATGNLKDEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEMA (60 kDa chaperonin OS=Thermotoga maritima GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV---EIKEPEPAMP 440 KEKK R+EDAL+AT+AA TLLR V+ + E L+ DE K+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++V E K+ P+MP Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGDE-KIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPSMP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNS3 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9311) GN=groL2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 K+KKLR+EDA+NATKAA TL ++ ++ + + EE +GA+IV AL PL IA+NAGVNG+VV+E V S + GYNAA G Y D+++AGI+DP KV R L++A+S+A L ++C+V ++ E + A AG M Sbjct: 388 KDKKLRLEDAINATKAAVEEGIVPGGGTTLAHMAPALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENV-KSKSFNEGYNAANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKEAAAAGGGM 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KE+K RV+DAL+AT+AA LLR +D +K ND+++ G DIV+RAL P + IA NAG +G+ + K+L S ++ +G+NAATG YEDL+ AG+IDP KVVR L+ A+SVA + ++ +V E+ + E A P Sbjct: 390 KERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGLKAA--NDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + ++ +K DN E++ G IV RA+ PL+ I KNAG SVV KVL + +GYNAA+G Y D++ G++DP KV R L+HA+SVA L +DC++ E+ E +PA AG P D G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALLRARATLENLKT--DNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGN-FGYNAASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPA--AGMP-DMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RVEDALNAT+AA LLR V I DN + + G +IV +AL P++ IA+NAGV GS+V K+L + + +G++A T +Y D++A GI+DP KVVR L+ ASSVA + ++ +V E+ KE PAMP G M G Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAMVAELPKEAAPAMPGGGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROMA (60 kDa chaperonin 1 OS=Prochlorococcus marinus GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27 Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-----GNPMDNSG 467 K +KLR+EDALNAT+AA TL++L ++D++ ++LD D+ G DI+K+AL P K IA NAG NG VV ++ G+NAATG YEDL++AGIID KV+R L+ A S+A + ++ ++ + +PEP PA G+PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGSTLIKLGEELDSLSKSLDGDQA-TGVDIIKKALSAPAKQIALNAGENGDVVVSEIQRLGK---GFNAATGQYEDLISAGIIDAVKVIRLALQDAVSIASLLITTEVIIAD--KPEPPSPAGGEGGGDPMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THIDA (60 kDa chaperonin OS=Thiobacillus denitrificans (strain ATCC 25259) GN=groL PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 70/156 (44.87%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + AIK DN ++ G IV RA+ PL+ I KN G SVV KVL + + +GYNA T Y D++A G++DPTKV R L++A+S+A L +DC+V ++ E + PAMP G M + G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRAKAAAAAIKG--DNHDQDAGVKIVLRAIEEPLRQIVKNCGDEPSVVVNKVLEGEGN-FGYNAGTSEYGDMVAMGVLDPTKVTRTALQNAASIAGLMLTTDCMVADLPEDKAPAMPMGGGMGDMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27 Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KEKK R+EDAL+AT+AA TLLR V+ + E L+ DE K+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++VE E + P+ Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGDE-KIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPS 533 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |