CF835722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38 Identity = 98/239 (41.00%), Postives = 127/239 (53.14%), Query Frame = -3 Query: 153 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNR--YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 752 VASIV+ FD + ++ A+C +FYT DAF+ AA A+P F + G + +KRE+AAF A +HET C+ EE + YC +Q+ Q+PC GK YYGRGPIQL+ N NYG AG+AIG D L P+ VA D VSF TA WFWMT P + G+G ING +ECG + +V RIG+YK YC+ GV+ NL C Sbjct: 81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYC-QQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDC 318
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38 Identity = 88/225 (39.11%), Postives = 124/225 (55.11%), Query Frame = -3 Query: 192 NVASIVTPQFFDG-IKNQAAASCAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 755 ++ S+++ FD +K++ +C GK+ FY+ +AF+NAA+++ FG+ G KREIAAFFA +HET C++ E YC Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA DPV+SFK+A+WFWMT P + GFG ING +ECG ++VQ RIG+Y+ YC Sbjct: 77 DIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSG-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYC 300
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.455e-37 Identity = 101/257 (39.30%), Postives = 132/257 (51.36%), Query Frame = -3 Query: 147 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 806 A +LA+A + Q V S++T F+ + N+ + C + FYT DAF+ AA ++P FG+ GS E+ +RE+AAFF +HET C+ EEINK+ YYGRGPIQLTG NY AAG A+G D + P+ V+ D VVSFKTA+WFWMT + H V+ G+G ING +ECG G+ A V RIGYYK YC+ G G NL C N Sbjct: 15 AAASLLAVA-ASGAAAQGVGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKAT--------------SPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNLDCYN 255
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.481e-37 Identity = 99/264 (37.50%), Postives = 132/264 (50.00%), Query Frame = -3 Query: 147 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 830 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ +I++S+RY YGRGPIQLT NY AG+ IG D + P+ VA DP++SF+TA+WFWMT + H V+ G+G ING +EC V++RIG+Y+ YC V G NL C N Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNN 246
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.233e-37 Identity = 99/264 (37.50%), Postives = 131/264 (49.62%), Query Frame = -3 Query: 147 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 830 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++++I +S+RY YGRGPIQLT NY AG+ IG + + P+ VA DP++SFKTA+WFWMT + H V+ G+G ING ECG ++RIG+Y+ YC V G NL C N Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNN 246
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.429e-37 Identity = 95/254 (37.40%), Postives = 127/254 (50.00%), Query Frame = -3 Query: 147 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKR-EIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 806 AL + F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG+ + ++R EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AIG + + P+ VA D +SFKTA+WFWMT + H V+ G+G ING +ECG + V+ RIGYY+ YC VAPG NL C N Sbjct: 9 ALFCCVFFLFLTGSLAQGIGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYN 246
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.231e-36 Identity = 95/245 (38.78%), Postives = 121/245 (49.39%), Query Frame = -3 Query: 147 FPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC*N 779 F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG SG ++EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AI D + P+ VA D +SFKTA+WFWMT + H V+ G G ING +ECG A V+ RIGYY+ YC VAPG NL C N Sbjct: 18 FLTGSLAQGIGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYN 246
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 4.680e-36 Identity = 94/237 (39.66%), Postives = 121/237 (51.05%), Query Frame = -3 Query: 153 VASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM------TNVHPVMN---------------QGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 752 ++ I+ FD + K + A C FYT +AF++AAK +P FG+ G + KREIAAF +HET CY++EIN YCD + Y CV GK Y GRGPIQL+ N NYG G + L+ PE V DPV+SFKTA+WFWM + H V+ G+G ING +ECG G A + RIG+YK YC+ G G NL C Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSN-YQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.112e-36 Identity = 90/230 (39.13%), Postives = 122/230 (53.04%), Query Frame = -3 Query: 153 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 752 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT + H V+ G+G T + G ++C G R+ +YK YC+ GV GPNL C Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of CF835722 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.112e-36 Identity = 90/230 (39.13%), Postives = 122/230 (53.04%), Query Frame = -3 Query: 153 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 752 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT + H V+ G+G T + G ++C G R+ +YK YC+ GV GPNL C Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDC 323 The following BLAST results are available for this feature:
BLAST of CF835722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835722 ID=CF835722; Name=CF835722; organism=Citrus sinensis; type=EST; length=853bpback to top |