CF835723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.042e-35 Identity = 92/233 (39.48%), Postives = 118/233 (50.64%), Query Frame = 2 Query: 80 LAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 L F T Q+V +IVT F+ +KN+ C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ E N+ G +YGRGPIQLTG NY AG+AIG D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q QV+ RIG+Y+ YC Sbjct: 8 LLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM---------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYC 225
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.042e-35 Identity = 86/225 (38.22%), Postives = 122/225 (54.22%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 ++ +++ FD + N + C GK+ FY+ +AF++AA ++P FG+ G KREIAAF A +HET C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYC 290
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.257e-34 Identity = 93/249 (37.35%), Postives = 126/249 (50.60%), Query Frame = 2 Query: 35 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++ +I++S+RY YGRGPIQLT NY AG+ IG D + P+ VA DP++SF+TA+WFWMT + H V+ G+G ING +EC V++RIG+Y+ YC Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYC 231
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.257e-34 Identity = 95/242 (39.26%), Postives = 125/242 (51.65%), Query Frame = 2 Query: 59 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYC 673 A +LA+A + Q V S++T F+ + N+ + C + FYT DAF+ AA ++P FG+ GS E+ +RE+AAFF +HET C+ EEINK+ YYGRGPIQLTG NY AAG A+G D + P+ V+ D VVSFKTA+WFWMT + H V+ G+G ING +ECG G+ A V RIGYYK YC Sbjct: 15 AAASLLAVA-ASGAAAQGVGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKAT--------------SPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYC 240
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.851e-34 Identity = 93/249 (37.35%), Postives = 125/249 (50.20%), Query Frame = 2 Query: 35 MKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 MK NIV+ + L F T + QN SIVT + F+ +N A C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G C++++I +S+RY YGRGPIQLT NY AG+ IG + + P+ VA DP++SFKTA+WFWMT + H V+ G+G ING ECG ++RIG+Y+ YC Sbjct: 1 MKFNIVSPVALSCLFFLFLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYC 231
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.560e-33 Identity = 89/224 (39.73%), Postives = 115/224 (51.34%), Query Frame = 2 Query: 113 VASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM------TNVHPVMN---------------QGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYC 673 ++ I+ FD + K + A C FYT +AF++AAK +P FG+ G + KREIAAF +HET CY++EIN YCD + Y CV GK Y GRGPIQL+ N NYG G + L+ PE V DPV+SFKTA+WFWM + H V+ G+G ING +ECG G A + RIG+YK YC Sbjct: 89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSN-YQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYC 310
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.760e-32 Identity = 87/239 (36.40%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 59 ALVGILALAFPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKR-EIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 AL + F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG+ + ++R EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AIG + + P+ VA D +SFKTA+WFWMT + H V+ G+G ING +ECG + V+ RIGYY+ YC Sbjct: 9 ALFCCVFFLFLTGSLAQGIGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYC 231
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32 Identity = 87/230 (37.83%), Postives = 113/230 (49.13%), Query Frame = 2 Query: 86 FPTKVMCQNVASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHET-----------GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 F T + Q + SIVT F+ +KN+ C FYT DAF+ AA ++P FG SG ++EIAAFF +HET G C++ + ++S+RY YGRGPIQLT NY AG AI D + P+ VA D +SFKTA+WFWMT + H V+ G G ING +ECG A V+ RIGYY+ YC Sbjct: 18 FLTGSLAQGIGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYC 231
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.049e-31 Identity = 83/217 (38.25%), Postives = 114/217 (52.53%), Query Frame = 2 Query: 113 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT + H V+ G+G T + G ++C G R+ +YK YC Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYC 310
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.049e-31 Identity = 83/217 (38.25%), Postives = 114/217 (52.53%), Query Frame = 2 Query: 113 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 VAS+VT F+ + ++ A+C + FY AF+ AA A+P F + G + KRE+AAF A +H T CY E ++ +C N ++PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT + H V+ G+G T + G ++C G R+ +YK YC Sbjct: 97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYC 310 The following BLAST results are available for this feature:
BLAST of CF835723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835723 ID=CF835723; Name=CF835723; organism=Citrus sinensis; type=EST; length=673bpback to top |