CF835723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30 Identity = 82/212 (38.68%), Postives = 103/212 (48.58%), Query Frame = 2 Query: 149 IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQ-YPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 + N+ SC GK FYT DA+ A + YP FG +G + KRE+AAFFA + ET C + E+N ++ YCD + K YPCV YYGRGP+QL N NYG G +G + L PE VA DPV+SF+ ALWFWM + H V+ GFG I EC + Q RI YY YC Sbjct: 76 LPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYC 285
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.373e-30 Identity = 79/184 (42.93%), Postives = 99/184 (53.80%), Query Frame = 2 Query: 182 KSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKD 667 + FYT DAF+ AAK++P F + GS +V KRE+AAF A +HET + + + Y Y+GRGPIQ++ N NYGAAGKAIG D LR P+ V D V FKTALWFWMT + H V+ G+G I+G VECG Q + V RIGYYKD Sbjct: 17 RGFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHET-----------TGGWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD 189
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.406e-30 Identity = 85/212 (40.09%), Postives = 113/212 (53.30%), Query Frame = 2 Query: 113 VASIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET-GHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP-------VMNQ--------------GFGATIQRINGAVECG-GKQPAQVQARIGYYKDYC 673 V SI+T F+ + ++ C G +FYT DAF+ AA +P+FG+ G+ E +RE+AAFF +HET G + + YC N+ P P YYGRGPIQLT NY AG A+G D + P+ V+ DPVV+F+TA+WFWMT P + NQ G+G ING ECG G + R+GYYK YC Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYC-RVNEITPSDPP--YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYC 234
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/211 (36.97%), Postives = 109/211 (51.66%), Query Frame = 2 Query: 122 IVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------------LCYIEEINKS-NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMNQGFGATIQRINGAV-------ECGGKQPAQVQARIGYYKDYC 673 +VT FD + + C + FY+ +FL AA+++P FG+ G KRE+AAF AH++ T LC+I + N +C + +PC GK Y RGPIQLT N NYG AG+AIG D ++ P+ V KDP++SFKTALWFWM+ + H ++ A + N V G A + IG+YK YC Sbjct: 133 VVTEPLFDQMFSHRK-DCPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVENPHAWGLCHINTTTVTENDFCTSSD--WPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLNANSAANRIPNKGVIGNIISRAFGHDDFAVRSSSIGFYKRYC 340
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.192e-21 Identity = 70/202 (34.65%), Postives = 92/202 (45.54%), Query Frame = 2 Query: 137 FFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMNQ---------------GFGATIQRINGAVECGGKQPAQV-QARIGYYKDYC 673 F D +K + C FYT +AF++AAK +P FG+ G + KREIAAF +HET N +P G Y G + N NYG G + L+ PE V DP ++FKTALWFWMT + H V+ + G+G ING +ECG P + RIG+YK YC Sbjct: 94 FDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHET-------------------NGWWPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYC 273
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20 Identity = 55/130 (42.31%), Postives = 66/130 (50.77%), Query Frame = 2 Query: 284 FAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 FAHVTHETG+ N YCD Q PC GK YYGRGPIQ++ N NYG AG+AIG DGL P+ VA+D + +KTAL F +NG G A + YY+ YC Sbjct: 24 FAHVTHETGN----------NAYCDPSKTQKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF------------------LVNGEEAVPGLSAANA---VSYYRQYC 122 The following BLAST results are available for this feature:
BLAST of CF835723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835723 ID=CF835723; Name=CF835723; organism=Citrus sinensis; type=EST; length=673bpback to top |