CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.925e-58 Identity = 114/200 (57.00%), Postives = 143/200 (71.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAG I YA++ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ GVV T DA A + A++VG PR GMERKD++ N +I+ AQ AL + A+ + KVLVV NPANTNALI + AP + +N T +TRLDHNR + Q++E+ N V+DVK +IIWGNHSS+QYPD+ TVN Sbjct: 2 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEITPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKALNEVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRGMAQLAEETNSTVNDVKKMIIWGNHSSTQYPDLTECTVN 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.283e-58 Identity = 113/197 (57.36%), Postives = 140/197 (71.07%), Query Frame = 3 Query: 90 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 P++VLVTGAAGQI Y+L+ MIA G M G QPVILH+LDIP A+AL GV MEL D ++PL++ VVATTD A +N+A++VG FPR GM+RKD++ NVSI+K Q AL ++A+ KVLVV NPANTNAL A +P N + LTRLD NRA ISEK+ V +V NVIIWGNHS +Q PDVNH + Sbjct: 61 PIKVLVTGAAGQIAYSLMFMIASGQMFGPHQPVILHLLDIPKMADALKGVVMELQDCSYPLLQSVVATTDIQTAFLHINVAILVGAFPRGPGMQRKDLLKVNVSIFKEQGEALNKYASRGVKVLVVGNPANTNALTALMKASDLPTSNFSALTRLDQNRAQSMISEKVGTNVDNVHNVIIWGNHSQTQVPDVNHGYI 257
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_PSYCK (Malate dehydrogenase OS=Psychrobacter cryohalolentis (strain K5) GN=mdh PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.288e-58 Identity = 118/212 (55.66%), Postives = 149/212 (70.28%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+PVRV VTGAAG I YA++ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ GVV T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNA+I + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN KP +LV Sbjct: 4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGVVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNAVIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN----GKPALDLV 211
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.288e-58 Identity = 113/203 (55.67%), Postives = 143/203 (70.44%), Query Frame = 3 Query: 75 LMAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 + K PVRV VTGAAGQI Y+L+ IA G MLG DQPVIL +L+I PA EALNGV MEL D AFPL+ G+ T DA A + A++VG PR GMERKD++ N +I+ AQ A+ +A+ KVLVV NPANTNALI + AP I + T +TRLDHNRA+ Q++ KL V+DVK ++IWGNHSS+QYPD++H V+ Sbjct: 1 MFMKAPVRVAVTGAAGQISYSLLFRIASGDMLGKDQPVILQLLEITPALEALNGVIMELEDCAFPLVAGITGTDDANVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSAQGKAINDNASKGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRAMAQLANKLGKTVNDVKKMLIWGNHSSTQYPDLHHCEVD 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.601e-58 Identity = 114/200 (57.00%), Postives = 144/200 (72.00%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAG I YA++ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ G+V T DA A V+ A++VG PR GMERKD++ N +I+ AQ AL A+ + KVLVV NPANTNALI + AP + +N T +TRLDHNRA+ Q++ K + V+DVK +IIWGNHSS+QYPD+ +TVN Sbjct: 4 KQPVRVAVTGAAGNISYAMLFRIASGEMLGKDQPVILQLLEIAPALDALKGVVMELEDCAFPLLAGIVQTDDATVAFKDVDYALLVGSRPRGPGMERKDLLEANAAIFSAQGKALNDVASRDVKVLVVGNPANTNALIAQRNAPDLDPRNFTAMTRLDHNRAMAQLAGKTDSTVNDVKKMIIWGNHSSTQYPDLTASTVN 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.780e-57 Identity = 110/202 (54.46%), Postives = 143/202 (70.79%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M + PV V VTGAAGQIGYAL+ IA G ++G D PV L +L+IP A +A G MEL D AFPL++G+ T DA A G N+A++VG PR +GMER D++ N I+K Q A+ AA + +VLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++KL V V+D+K + IWGNHS++QYPD+ HA VN Sbjct: 1 MTQAPVTVTVTGAAGQIGYALLFRIASGQLIGPDTPVRLRLLEIPQAVKAAEGTAMELDDCAFPLLQGIEVTDDARTAFDGTNVALLVGARPRTKGMERGDLLEANGGIFKPQGEAINAGAADDVRVLVVGNPANTNALIAQAHAPDVPAERFTAMTRLDHNRALTQLAQKLGVSVNDIKKLTIWGNHSATQYPDLFHAEVN 202
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.741e-57 Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M + PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+I PA +A G MEL D AFPL++G+ T D A G N+A++VG PR +GMER D++ N I+K Q A+ HAA + KVLVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++K V+D+K + IWGNHS++QYPD+ HATV Sbjct: 1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIEITDDPNVAFDGANVALLVGARPRTKGMERGDLLEANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALTQLAKKTGSTVADIKRLTIWGNHSATQYPDIFHATV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.192e-57 Identity = 115/212 (54.25%), Postives = 148/212 (69.81%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L+I PA +AL GV MEL D A+PL+ VV + D + A + A++VG PRK GMER D++ N I+K Q AL Q A+ + KVLVV NPANTNALI ++ AP + + T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD++ ATV G +P +LV Sbjct: 4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVVMELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGQALNQVASRDVKVLVVGNPANTNALIAQQNAPDLDPRQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATV----GGRPALDLV 211
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.087e-57 Identity = 112/204 (54.90%), Postives = 144/204 (70.59%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK P+RV VTGAAGQIGY+L+ IA G +LG DQPVIL +L+IP A +AL GV MEL D AFPL+ G+ A +D + A +++A++VG PR GMERKD++S N I+ AQ AL A KVLVV NPANTNA I + AP IPAKN T + RLDHNRAL Q++ KLN V+D++ +++WGNHS + YPD AT++ Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALTGVMMELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLRLDHNRALSQLANKLNKPVADIEKLVVWGNHSPTMYPDYRFATID 204
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.087e-57 Identity = 112/200 (56.00%), Postives = 143/200 (71.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K+PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ +V + D + A + A++VG PRK GMER D++ N I+K Q AL + A+ + KVLVV NPANTNALI ++ AP + K T + RLDHNRA+ Q++EK VS +KN+ IWGNHSS+QYPD++ ATVN Sbjct: 8 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALAGVVMELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALNKVASRDVKVLVVGNPANTNALIAQQNAPDLDPKQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATVN 207 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |