CF835909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.941e-56 Identity = 112/212 (52.83%), Postives = 142/212 (66.98%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVNTAAGEKPVRELV 719 K PVRV VTGAAGQI Y+L+ IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPL+ G+V T D A + A++VG PR GMERKD+++ N +I+ Q A+ HA+ N KVLVV NPANTNALI + AP I + T +TRLDHNRAL Q++ K ++++ +IWGNHSS+QYPD++ NT KP LV Sbjct: 2 KAPVRVTVTGAAGQISYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVAMELDDCAFPLLAGIVTTDDPSVAFKDSDYALLVGARPRGPGMERKDLLAANAAIFSVQGKAINDHASKNIKVLVVGNPANTNALIAQRNAPDISPRQFTAMTRLDHNRALSQLATKTGTSINNITKALIWGNHSSTQYPDLH----NTLVDGKPALSLV 209
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_AZOSB (Malate dehydrogenase OS=Azoarcus sp. (strain BH72) GN=mdh PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.941e-56 Identity = 110/205 (53.66%), Postives = 142/205 (69.27%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 M+K PVRV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPL+ G++AT D A +A++VG PR GMERKD++++N I+ Q +A+ Q+A P+CKVLVV NP NTNA I KE A +PAKN T + RLDHNRAL Q++ K +VS +KN+++WGNHS + Y D N Sbjct: 1 MSKAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLDLPQAQKAVKGVMMELEDCAFPLLAGMIATDDPNVAFKDAKVALLVGARPRGPGMERKDLLTENAKIFTVQGAAIGQYADPDCKVLVVGNPCNTNAYIAKEVAQKYGRVPAKNFTGMLRLDHNRALSQLAGKSGREVSSLKNLVVWGNHSPTMYADYRFVKSN 205
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_RALEJ (Malate dehydrogenase OS=Ralstonia eutropha (strain JMP134) GN=mdh PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55 Identity = 109/202 (53.96%), Postives = 140/202 (69.31%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 MAK P+RV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++ N I+ Q AL++ A+ N KVLVV NPANTNA I + APS+P +N T + RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D +ATV+ Sbjct: 1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRNVKVLVVGNPANTNAYIAMKSAPSLPRENFTAMLRLDHNRALSQIAAKTGKPVASIEKMFVWGNHSPTMYADYRYATVD 202
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.525e-55 Identity = 107/201 (53.23%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M + PV V VTGAAGQIGYAL+ IA G +LG D PV L +L+I PA +A G MEL D AFPL++G+ T D A G N+ ++VG PR +GMER D++S N I+K Q A+ +AA + K+LVV NPANTNALI + AP +PA+ T +TRLDHNRAL Q+++K V+D+K + IWGNHS++QYPD+ HA+V Sbjct: 1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIDITDDPNVAFDGTNVGLLVGARPRTKGMERGDLLSANGGIFKPQGKAINDNAADDVKILVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALTQLAKKTGSTVADIKRLTIWGNHSATQYPDIFHASV 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.525e-55 Identity = 110/200 (55.00%), Postives = 137/200 (68.50%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVN 683 K PVRV VTGAAGQIGY+L+ IA G MLG DQPVILH+LD+P A AL GV MEL D AFPL+ G+VAT D A V +A++VG PR +GMERKD++ N +I+ Q AL HAA + KVLVV NPANTNA I + AP + KN T + RLDHNRAL QI+ K V+ ++ + +WGNHS + Y D AT++ Sbjct: 2 KAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILHLLDLPQAQTALKGVMMELEDCAFPLLAGMVATDDPNVAFKDVKVALLVGARPRSKGMERKDLLEANGAIFTVQGKALNDHAARDVKVLVVGNPANTNAWIAMKSAPDLDPKNFTAMLRLDHNRALSQIAAKTGKPVASIEKLAVWGNHSPTMYADYRFATID 201
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.202e-54 Identity = 108/199 (54.27%), Postives = 136/199 (68.34%), Query Frame = 3 Query: 84 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 K PVRV VTGAAGQI Y+L+ IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPL+ G+V + D A + A++VG PR GMERKD++ N +I+ Q A+ HA+ + KVLVV NPANTNALI + AP I + T + RLDHNR L Q++ KL+V + D+ + IWGNHS++QYPD+ H V Sbjct: 2 KAPVRVAVTGAAGQISYSLLFRIAAGEMLGKDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAINDHASRDIKVLVVGNPANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPDLFHTLV 200
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54 Identity = 108/200 (54.00%), Postives = 136/200 (68.00%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHAT 677 MAK RV VTGAAGQIGY+L+ IA G MLG DQPVIL +LD+P A A+ GV MEL D AFPL+ GVV T D A ++A++VG PR +GMERKD++S N I+ Q AL + A+ + KVLVV NPANTNA I + AP +P KN T + RLDHNRAL Q++ K VS ++ +++WGNHS + YPD AT Sbjct: 1 MAKPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVSSIEKLVVWGNHSPTMYPDFRVAT 200
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BORPE (Malate dehydrogenase OS=Bordetella pertussis GN=mdh PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54 Identity = 113/203 (55.67%), Postives = 140/203 (68.97%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+K +RV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV MEL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV Sbjct: 1 MSKPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BORPA (Malate dehydrogenase OS=Bordetella parapertussis GN=mdh PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54 Identity = 113/203 (55.67%), Postives = 140/203 (68.97%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+K +RV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV MEL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV Sbjct: 1 MSKPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV 203
BLAST of CF835909 vs. ExPASy Swiss-Prot
Match: MDH_BORBR (Malate dehydrogenase OS=Bordetella bronchiseptica GN=mdh PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.876e-54 Identity = 113/203 (55.67%), Postives = 140/203 (68.97%), Query Frame = 3 Query: 78 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLIKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV 680 M+K +RV VTGAAGQIGYAL+ IA G MLG DQPVIL +L+IP A +AL GV MEL D AFPL+ V A +D A ++A++VG PR GMERKD++S N I+ AQ AL A+ N KVLVV NPANTNA I + AP +PAKN T + RLDHNRAL Q+S K +V+D++ +I+WGNHS + YPD ATV Sbjct: 1 MSKPALRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLHEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGRALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLSAKSGKRVADIEKLIVWGNHSPTMYPDFRFATV 203 The following BLAST results are available for this feature:
BLAST of CF835909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835909 ID=CF835909; Name=CF835909; organism=Citrus sinensis; type=EST; length=719bpback to top |