CF835923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 192/252 (76.19%), Postives = 222/252 (88.10%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEI+D LDRIRKL+D CTGLQGFLVF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 192/252 (76.19%), Postives = 222/252 (88.10%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEI+D LDRIRKL+D CTGLQGFLVF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 192/252 (76.19%), Postives = 222/252 (88.10%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEI+D LDRIRKL+D CTGLQGFLVF++ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 191/252 (75.79%), Postives = 221/252 (87.70%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEIVD+ LDRIRKLADNC GLQGFL+F++ VDYGKKSKL F +YP+PQV+T+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV+EITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA3_DROME (Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D PE=1 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 194/252 (76.98%), Postives = 220/252 (87.30%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++ VDYGKKSKL F VYP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M K DPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.945e-114 Identity = 193/252 (76.59%), Postives = 221/252 (87.70%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEI+DL LDRIRKLAD CTGLQGF VF++ VDYGKKSKL F++YP+ QVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGF Sbjct: 61 ANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 312
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2) HSP 1 Score: 409.068 bits (1050), Expect = 1.355e-113 Identity = 192/252 (76.19%), Postives = 221/252 (87.70%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 A+N++RGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++ VDY KKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTKRTIQFVDWCPTGF Sbjct: 100 ASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.355e-113 Identity = 192/252 (76.19%), Postives = 220/252 (87.30%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEIVD+ LDRIRKLAD CTGLQGFL+F++ VDYGKKSKL F VYP+PQV+T+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKRTIQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA_NOTVI (Tubulin alpha chain OS=Notophthalmus viridescens PE=2 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 2.312e-113 Identity = 191/252 (75.79%), Postives = 221/252 (87.70%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEI+D LDR+RKLAD CTGLQGFLVF++ VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNRL+SQ++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIIDQVLDRMRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351
BLAST of CF835923 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 407.527 bits (1046), Expect = 3.943e-113 Identity = 191/252 (75.79%), Postives = 220/252 (87.30%), Query Frame = 2 Query: 2 ANNFSRGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 757 ANN++RGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F++ VDYGKKSKL F VYP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVIS+EKAYHEQL+V+EITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTKR+IQFVDWCPTGF Sbjct: 100 ANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351 The following BLAST results are available for this feature:
BLAST of CF835923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 421
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835923 ID=CF835923; Name=CF835923; organism=Citrus sinensis; type=EST; length=759bpback to top |