CF835930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835930 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 198 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCY-IHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGL---AMTEAI 737 Q F GA+VV+ DV + A +LG DV + CDV+ +V L+ T V +FG LD++VN N ++ + + ++AV+ G + + AA +M R+RG I+ + + + G N Y +K GI+G+ K A EL GIRV+ ++ GL AMTEA+ Sbjct: 25 QRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVN---NAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIV--NMSSVSGKVGMVGQTN-----YSAAKAGIVGMTKAAAKELAHLGIRVNAIAP--GLIRSAMTEAM 196
BLAST of CF835930 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 198 QLFHKNGAKVVIADVQDNLGQALADKLGNQDVCY-IHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGL---AMTEAI 737 Q F GA+VV+ DV + A +LG DV + CDV+ +V L+ T V +FG LD++VN N ++ + + ++AV+ G + + AA +M R+RG I+ + + + G N Y +K GI+G+ K A EL GIRV+ ++ GL AMTEA+ Sbjct: 25 QRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVN---NAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIV--NMSSVSGKVGMVGQTN-----YSAAKAGIVGMTKAAAKELAHLGIRVNAIAP--GLIRSAMTEAM 196
BLAST of CF835930 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 53/188 (28.19%), Postives = 96/188 (51.06%), Query Frame = 3 Query: 210 KNGAKVVIADVQDNLGQALADKLGNQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN---TGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLAMTEAIASI 746 K GA V++AD+ + G +A +LG++ V ++ DV++E++V + T KFG+LD+ VN T ++ F + D + ++ +NT+G F V + +A +M +RG I+ T + A +G I Y SK ++G+ +A +L GIR+ ++ GL T +A++ Sbjct: 26 KQGASVILADLPSSKGNEVAKELGDK-VVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIV-----NTASVAAFDG--QIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAP--GLFNTPMLAAL 203 The following BLAST results are available for this feature:
BLAST of CF835930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835930 ID=CF835930; Name=CF835930; organism=Citrus sinensis; type=EST; length=759bpback to top |