CF972318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16 Identity = 55/216 (25.46%), Postives = 97/216 (44.91%), Query Frame = 2 Query: 83 LKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQM--KINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNGE 721 L+ A +WG L+NHGIS + E+ + + + + + ++ + K G + + L+WE FF P ++S P D E+A L LA ++L + K++ YP CP+PEL G+ AHTD + + + V GLQL ++W+ + +SI+++IGD +E+++NG+ Sbjct: 16 LRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGD---NLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGK 226
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 61/250 (24.40%), Postives = 103/250 (41.20%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWED---YFFHLIYPEDKRDMSIWPKTPSDYTEAT------------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718 +P +D+ + D + ++ A G + HG+ L FF P+ EK + + G + GY S A+ + +L W++ + FH D + P +DY +T +Y +++ L+ I+ + M+ NYYP CP+PE LG H D +ALT +L + V GL++ +W VP +++++IGDT LSNG Sbjct: 63 MPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRA--RRVPGTVSGYTSAHADRFASKLPWKETLSFGFH--------DRAAAPVV-ADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSI---MRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNG 298
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.981e-16 Identity = 61/250 (24.40%), Postives = 103/250 (41.20%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWED---YFFHLIYPEDKRDMSIWPKTPSDYTEAT------------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718 +P +D+ + D + ++ A G + HG+ L FF P+ EK + + G + GY S A+ + +L W++ + FH D + P +DY +T +Y +++ L+ I+ + M+ NYYP CP+PE LG H D +ALT +L + V GL++ +W VP +++++IGDT LSNG Sbjct: 63 MPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRA--RRVPGTVSGYTSAHADRFASKLPWKETLSFGFH--------DRAAAPVV-ADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSI---MRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNG 298
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15 Identity = 63/244 (25.82%), Postives = 98/244 (40.16%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEAT---------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718 VP ID+ + S D + + +A G +VNHGI +L R FF P+ EK++ G+ GY S + +L W++ P D P DY AT YAR ++ L + M++NYYP C +P LG H D ++LT + + V GLQ+ + +W + + ++ +++IGDT LSNG Sbjct: 39 VPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHP--GESCGYASSFTGRFASKLPWKETLSFRSCPSD-------PALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNG 273
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 58/234 (24.79%), Postives = 102/234 (43.59%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 715 +PTIDL + E V RE ++K A +G +NHG+ D+ E++ + F DQ E ++ + + K++ Y S S W D ++ P+ + + P E EY++++ LA + + M + +P CP+P G HTD S LT +L++ GLQ+ Y W+ P ++I ++GD ++++SN Sbjct: 55 IPTIDLGGV-FESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLK-YHSNADLYESPAASWRDTLSCVMAPDVPKAQDL----PEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLW---MLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISN 279
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 58/244 (23.77%), Postives = 110/244 (45.08%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDY--FFHLIYPEDKRDMSIWP----KTPSDYT----EATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSN 715 V +++ ID ER ++ +A G +VNHGI L E R AFF P+ EK++ ++ +G+ GY S + +L W++ F + +++ + + K +++ E S Y ++ L+ +++ V M++NYYP C +P LG H D ++LT + + V GL+++ + +W + P ++++++GDT LSN Sbjct: 41 VEELEVALIDVGAGAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRA--QRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSN 282
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 62/244 (25.41%), Postives = 98/244 (40.16%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEAT---------SEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYKDKWVTAKCVPNSIILHIGDTIEILSNG 718 VP I++ + S D + + +A G +VNHGI +L R FF P+ EK++ G+ GY S + +L W++ P D P DY AT YAR ++ L + M++NYYP C +P LG H D ++LT + + V GLQ+ + +W + + ++ +++IGDT LSNG Sbjct: 39 VPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRP--GESCGYASSFTGRFASKLPWKETLSFRSCPSD-------PALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNG 273
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 51/241 (21.16%), Postives = 109/241 (45.23%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPE--DKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPE---LALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 718 +P ++L + +++ R+ KA ++G +VNHG+ +L R+++ FF P + N + GYG+K +G + W +Y P+ + +++ +TP + E+ EY ++++ ++ K+L + +++N+YP + + +G HTD ++ + N GLQ+ KD WV +S +++GD +++++NG Sbjct: 31 IPVVNLADPEAKTRIV---------KACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLP----QSLKNRAGPPEPYGYGNKRI-GPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNG 257
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.831e-14 Identity = 54/240 (22.50%), Postives = 104/240 (43.33%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFFHLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQ----PELALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 718 +P +DL + D++ + KA D+G ++NHGI D +++ FF P EKEK GYG+K +G + W +Y L+ + S++ + + +Y +R++A +IL + ++N+YP CP+ E +G HTD ++ + N G Q+ +D W++ +S +++GD++++++NG Sbjct: 27 IPLVDLSKPDAKTLIV---------KACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEK----AGPANPFGYGNKRI-GLNGDIGWIEYL--LLTTNQDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNG 250
BLAST of CF972318 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 56/240 (23.33%), Postives = 109/240 (45.42%), Query Frame = 2 Query: 14 VPTIDLKEIDSEDRVEREKCREELKKAAMDWGVMHLVNHGISDDLTERVKRAGQAFFDQPVEEKEKYANEQASGKIQGYGSKLANNASGQLEWEDYFF--HLIYPEDKRDMSIWPKTPSDYTEATSEYARQLRSLATKILAVXXXXXXXXXXXXXXXXXXXXXXXXQMKINYYPKCPQPEL--ALGVEAHTDVSALTFILHNMVPGLQLFYKD-KWVTAKCVPNSIILHIGDTIEILSNG 718 +P IDL + D+ + ++ KA ++G ++NHG+ DL ++++ FF K+K GYG+K +G L W +Y + E + +I+ TP+ + EA EY ++++ +++K L + +++N+YP+ + + +G HTD ++ + N GLQ+ KD WV +S + +GDT+++++NG Sbjct: 27 IPVIDLTDSDA---------KTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAGPPDPF----GYGTKRI-GPNGDLGWLEYILLNANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNG 252 The following BLAST results are available for this feature:
BLAST of CF972318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CF972318 ID=CF972318; Name=CF972318; organism=Citrus sinensis; type=EST; length=723bpback to top |