CK702010

Overview
NameCK702010
Unique NameCK702010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length250
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK702010_ssr1 microsatellite CK702010_ssr1:1..34. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.949e-11
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query:   37 DDNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHG 240
            + N +G GGFG+VYKG +  G  VAIKK   P  ++  G +EF  E+++LSRL H +LVSLIGYC  G
Sbjct:  523 ESNVIGVGGFGKVYKGVIDGGTKVAIKKSN-PNSEQ--GLNEFETEIELLSRLRHKHLVSLIGYCDEG 587          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1
Query:   40 DNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHG 240
            +N LG+GGFG VYKGT  +G+ VA+K++         G+ EF+ EV +L+RL H NLV L+G+C  G
Sbjct:  351 ENTLGQGGFGTVYKGTFPNGQEVAVKRLTK---GSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEG 414          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1
Query:   43 NFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            N LG+GGFG VYKGT  SG  VA+K++         GE EF  EV ++++L H NLV L+GYC  G+ +
Sbjct:  512 NKLGQGGFGEVYKGTFPSGVQVAVKRLSKT---SGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEK 577          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   37 DDNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            D N +G GG+G+VYKGTL +G+V+AIK+ +    +   G  EF+ E+++LSR+ H N+V L+G+C   K +
Sbjct:  636 DANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQ---GAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQ 703          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 31/71 (43.66%), Postives = 46/71 (64.79%), Query Frame = 1
Query:   37 DDNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            ++N +G+GG+G VY+G L  G  VA+K +   R      E EF+VEV+++ R+ H NLV L+GYC  G +R
Sbjct:  156 EENVIGEGGYGIVYRGILTDGTKVAVKNLLNNR---GQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYR 223          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 1
Query:   37 DDNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            + N +G+GGFG VYKGTL  G  VA+K++         GE EF+ EV ++++L H NLV L+G+C  G+ R
Sbjct:  339 ESNKIGQGGFGEVYKGTLSDGTEVAVKRLSK---SSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEER 406          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 1
Query:   37 DDNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYC 231
            +++ +GKG F  VYKG LR G  VA+K+  +   K+ +  +EFR E+D+LSRL+H +L+SL+GYC
Sbjct:  514 EESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNS-NEFRTELDLLSRLNHAHLLSLLGYC 577          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.342e-11
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   49 LGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYC 231
            +G+GG+G+VYKG L  G VVA+K+ E    +   G+ EF  E+++LSRL H NLVSL+GYC
Sbjct:  637 IGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQ---GQKEFFTEIELLSRLHHRNLVSLLGYC 694          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.670e-11
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 1
Query:   43 NFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            N LG+GG+G VY+G L +G  VA+KK+ L    +A  E EFRVEV+ +  + H NLV L+GYC  G HR
Sbjct:  187 NVLGEGGYGVVYRGKLVNGTEVAVKKL-LNNLGQA--EKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHR 252          
BLAST of CK702010 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.670e-11
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   40 DNFLGKGGFGRVYKGTLRSGEVVAIKKMELPRFKEADGEHEFRVEVDILSRLDHPNLVSLIGYCAHGKHR 249
            +N LG+GGFG VYKG    G+ +A+K++         G++EF+ E+ +L++L H NLV LIG+C  G+ R
Sbjct:  360 ENELGRGGFGSVYKGVFPQGQEIAVKRLS---GNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEER 426          
The following BLAST results are available for this feature:
BLAST of CK702010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ANX2_ARATH1.949e-1151.47Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
CRK40_ARATH2.545e-1147.76Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK23_ARATH2.545e-1147.83Putative cysteine-rich receptor-like protein kinas... [more]
Y5977_ARATH3.324e-1143.66Probable leucine-rich repeat receptor-like protein... [more]
Y1154_ARATH3.324e-1143.66Probable serine/threonine-protein kinase At1g01540... [more]
CRK10_ARATH3.324e-1145.07Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
ACR4_ARATH3.324e-1147.69Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5374_ARATH4.342e-1152.46Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH5.670e-1150.72Probable receptor-like protein kinase At2g42960 OS... [more]
CRK29_ARATH5.670e-1142.86Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5271 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE44E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK702010 ID=CK702010; Name=CK702010; organism=Citrus sinensis; type=EST; length=250bp
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGATGACAACTTTCT
TGGGAAAGGGGGGTTTGGCCGAGTTTACAAGGGCACTCTGCGGTCAGGAG
AGGTGGTTGCAATCAAGAAAATGGAGCTGCCACGATTTAAAGAAGCTGAC
GGGGAACACGAGTTCCGCGTAGAAGTTGATATCTTGAGCAGACTTGACCA
TCCAAATCTGGTCTCTTTGATAGGCTATTGTGCACATGGGAAGCACCGGT
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