CK740116
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_HUMAN (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4) HSP 1 Score: 104.76 bits (260), Expect = 3.186e-29 Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F +EREGE ++ + ++L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPF-KQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 905 HSP 2 Score: 44.2838 bits (103), Expect = 3.186e-29 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D S D +D Y+KL+ DI + DSE+ ++I Sbjct: 759 QAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEII 814
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP2_HUMAN (Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.211e-29 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 +YL +THAPTH+D+++ L ++F +E++GE + F + L NRMLLWHGSR++N+VGIL+ TGYMFGKGIYFAD+ SKSA Sbjct: 384 QYLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAF---REDLHNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSA 471 HSP 2 Score: 48.1358 bits (113), Expect = 3.211e-29 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 3 Query: 12 KVKMLEALQDIEIASRLVGFDVDSDDS-LDEKYKKLRCDIAPLPHDSEDYQLI 167 K+++LEAL DIEIA +LV ++ S + LD+ Y+ L C + PL H+S ++++I Sbjct: 330 KIQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCALRPLDHESYEFKVI 382
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_XENLA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis GN=parp1 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.033e-29 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 173 YLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 Y+ THA TH + LE+ E+F ++REGE+ ++ + ++L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 800 YVKNTHADTHNAYDLEVLEIFKIDREGEYQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 888 HSP 2 Score: 42.743 bits (99), Expect = 7.033e-29 Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLV--GFDVDSDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 ++KV+ML+ L DIE+A L+ G D D +D KY+K++ DI + DSE+ ++I Sbjct: 742 QAKVQMLDNLLDIEVAYSLLRGGADDGEKDPIDVKYEKIKTDIKVVAKDSEESRII 797
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_CHICK (Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 3.423e-28 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 +Y+ THA TH + L++ E+F +EREGE ++ + ++L NR LLWHGSR TNF GIL+Q TGYMFGKGIYFAD+VSKSA Sbjct: 813 QYVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPF-KQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSA 902 HSP 2 Score: 42.3578 bits (98), Expect = 3.423e-28 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIA-SRLVGFDVDSD-DSLDEKYKKLRCDIAPLPHDSEDYQLIE 170 ++KV+ML+ L DIE+A S L G + D D D +D Y+KLR DI + DSE+ ++I+ Sbjct: 756 QAKVQMLDNLLDIEVAYSLLRGGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKIIK 812
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP2_ARATH (Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.677e-27 Identity = 45/90 (50.00%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 173 YLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 Y+ THA TH+ +++E+ ++F R E D+F + KNRMLLWHGSR+TN+ GIL+Q TGYMFGKG+YFAD+ SKSA Sbjct: 441 YMENTHAKTHSGYTVEIAQLFRASRAVEADRFQQFSSS-KNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSA 529 HSP 2 Score: 46.9802 bits (110), Expect = 1.677e-27 Identity = 21/55 (38.18%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLVGFDVD-SDDSLDEKYKKLRCDIAPLPHDSEDYQLI 167 K K++M+EAL +IE+A++L+ D DD L Y++L C + P+ +DSE++ ++ Sbjct: 384 KQKIEMVEALGEIELATKLLSVDPGLQDDPLYYHYQQLNCGLTPVGNDSEEFSMV 438
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PRP2B_ORYSJ (Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica GN=PARP2-B PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.185e-27 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 173 YLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 YL TH THT +++++ ++F + R GE ++F + NRMLLWHGSR+TN+ GIL+Q +G+MFGKG+YFAD+ SKSA Sbjct: 407 YLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQKFA-SAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSA 495 HSP 2 Score: 50.447 bits (119), Expect = 2.185e-27 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIASRLVGFDV-DSDDSLDEKYKKLRCDIAPLPHDSEDYQLIES 173 K+K++M+EAL +IEIA +L+ D D D L +YK+ CD PL DSE+Y +I++ Sbjct: 350 KAKLEMVEALSEIEIAIKLLEDDSSDQDHPLYARYKQFCCDFTPLEVDSEEYSMIKT 406
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP_DROME (Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 +Y+ THA TH + L++ +VF + R+GE +F + +KL NR LLWHGSR+TNFVGIL+ TGYMFGKGIYFAD+VSKSA Sbjct: 798 QYVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPF-KKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSA 887
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.054e-21 Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKSA 442 KY+ THA TH + LE+ ++F + R+GE ++ + +KL NR LLWHGSR+TNF GIL+ TGYMFGKGIYFAD+VSKSA Sbjct: 801 KYVKNTHAETHKLYDLEVVDIFKVARQGEARRYKPF-KKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGYMFGKGIYFADMVSKSA 890
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PME1_CAEEL (Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans GN=pme-1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.920e-20 Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGKGIYFADLVSKS 439 +YL TH TH D +EL ++ L R+ E KF +R + NR LLWHGS NF GIL Q +GYMFGKG+YFAD+ SKS Sbjct: 745 QYLKNTHGATH-DLKVELIDILKLNRDNESSKF---KRHIGNRRLLWHGSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVYFADMFSKS 830 HSP 2 Score: 36.1946 bits (82), Expect = 9.920e-20 Identity = 23/60 (38.33%), Postives = 33/60 (55.00%), Query Frame = 3 Query: 6 KSKVKMLEALQDIEIA-SRLVGFDVDSDDSL-----DEKYKKLRCDIAPLPHDSEDYQLI 167 K K ML AL DI+ A ++ G DV + SL D Y+KL+C + PL +D+ +I Sbjct: 684 KEKNNMLNALLDIKFAYDQISGGDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWNMI 743
BLAST of CK740116 vs. ExPASy Swiss-Prot
Match: PARP1_ONCMA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou GN=parp1 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 4.005e-16 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 170 KYLHTTHAPTHTDWSLELEEVFSLEREGEFDKFSSYQRKLKNRMLLWHGSRVTNFVGILTQDXXXXXXXXXXTGYMFGK 406 +Y+ THA TH ++L +EE+F + REGE+ K+ +Q L NR LLWHGSR TN+ GIL+Q TGYMFGK Sbjct: 58 QYVKNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQ-DLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK 135 The following BLAST results are available for this feature:
BLAST of CK740116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740116 ID=CK740116; Name=CK740116; organism=Citrus sinensis; type=EST; length=443bpback to top |