CK740118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_PROM3 (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9303) GN=speA PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.139e-12 Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAE 318 Y +GMFL GAY+E +G +HNLFG + V + + G + + + G + +VL M+H P+++ E L+ +E Sbjct: 545 YMIGMFLAGAYQEVMGNLHNLFGSTNAVHIRMTTG-GGYQIDHVVRGNTNSEVLEAMEHNPEILLERLRLASE 616 HSP 2 Score: 33.113 bits (74), Expect = 1.139e-12 Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGG---TSLPLHEM 68 CDSDGK+D+FIG G T L LH + Sbjct: 515 CDSDGKLDRFIGNGQTKTLLELHNL 539
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_GLOVI (Biosynthetic arginine decarboxylase OS=Gloeobacter violaceus GN=speA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.921e-12 Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 1 Query: 97 PYYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSD--GPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEE 321 PYYLGMFL GAY+E LG +HNLFG + V + L SD G S+ + + G + +VL+ +Q++ + M E+++ E+ Sbjct: 527 PYYLGMFLNGAYQEILGDMHNLFGDTNTVHIHLASDEPGEQSYRLEHVVKGDTMTEVLKYVQYDHEAMLESIRRETEQ 604 HSP 2 Score: 26.5646 bits (57), Expect = 1.921e-12 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 3 CDSDGKIDKFI 35 CDSDGKID+FI Sbjct: 498 CDSDGKIDQFI 508
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_PROMM (Biosynthetic arginine decarboxylase OS=Prochlorococcus marinus (strain MIT 9313) GN=speA PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.239e-12 Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRV-LQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAE 318 Y +GMFL GAY+E +G +HNLFG + V + L + G + V + G + +VL M+H P+L+ E L+ +E Sbjct: 545 YMIGMFLAGAYQEVMGNLHNLFGSTNAVHIRLTTAG--GYQVDHVVRGNTNSEVLEAMEHNPELLLERLRLASE 616 HSP 2 Score: 33.113 bits (74), Expect = 3.239e-12 Identity = 15/25 (60.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGG---TSLPLHEM 68 CDSDGK+D+FIG G T L LH + Sbjct: 515 CDSDGKLDRFIGNGQTKTLLELHNL 539
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_AVESA (Arginine decarboxylase OS=Avena sativa GN=SPE1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 9.219e-12 Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 94 GPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHE-PQLMFETLKHRAEE 321 G YY+ + L GAY+EAL HNLFGGPS+VRV+ + +F V A+ G + +++ + ++ Q + ++ RA E Sbjct: 501 GGYYVAVLLTGAYQEALSNKHNLFGGPSLVRVVGTGNGGAFNVEAALLGSTTEELIGTVSYDVKQDISSVIEERARE 577 HSP 2 Score: 34.2686 bits (77), Expect = 9.219e-12 Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEM 68 CDSDGK+DKFI ++PLH + Sbjct: 475 CDSDGKVDKFIRDTETMPLHPL 496
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA1_SYNY3 (Biosynthetic arginine decarboxylase 1 OS=Synechocystis sp. (strain PCC 6803) GN=speA1 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.009e-11 Identity = 28/75 (37.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 97 PYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEE 321 PYYLGMFL GAY+E +G +HNLFG +VV + + P + + + G + +VL +Q++P+ + E ++ E+ Sbjct: 585 PYYLGMFLVGAYQEIMGNLHNLFGDINVVHIQMN--PKGYQIEHLVRGDTIAEVLGYVQYDPEDLLENMRRYCEQ 657 HSP 2 Score: 26.5646 bits (57), Expect = 2.009e-11 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 3 CDSDGKIDKFI 35 CDSDGKID+FI Sbjct: 547 CDSDGKIDQFI 557
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_ANASP (Biosynthetic arginine decarboxylase OS=Anabaena sp. (strain PCC 7120) GN=speA PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.396e-11 Identity = 26/74 (35.14%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 97 PYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAE 318 PYY+GMFL GAY+E +G +HNLFG + V + + P + + + G + +V+ +Q++ + M E ++ R E Sbjct: 576 PYYMGMFLNGAYQEIMGNLHNLFGDTNAVHIQLT--PKGYQIEHVVKGDTMSEVVSYVQYDSEDMVENIRQRCE 647 HSP 2 Score: 26.9498 bits (58), Expect = 4.396e-11 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 3 CDSDGKIDKFI 35 CDSDGKID+FI Sbjct: 547 CDSDGKIDRFI 557 The following BLAST results are available for this feature:
BLAST of CK740118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740118 ID=CK740118; Name=CK740118; organism=Citrus sinensis; type=EST; length=444bpback to top |