CK740129

Overview
NameCK740129
Unique NameCK740129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:351..923. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 2.398e-88
Identity = 146/171 (85.38%), Postives = 160/171 (93.57%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YMVAQCLGA+CGVGLVKAF    ++  GGGAN++ASGY++G+ LGAEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YN DK WDDHWIFWVGP
Sbjct:   92 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGP 262          

HSP 2 Score: 33.113 bits (74), Expect = 2.398e-88
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAAI 574
            P +GA  AA YHQYILRA AI
Sbjct:  262 PLLGAAIAAFYHQYILRAGAI 282          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.061e-88
Identity = 150/172 (87.21%), Postives = 156/172 (90.70%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLIRAV YMVAQCLGAICGVG VKAF    Y + GGGAN +A GYN G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI+N  K WDDHWIFWVGPF
Sbjct:   83 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPF 254          

HSP 2 Score: 31.5722 bits (70), Expect = 9.061e-88
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAA 568
            PF+GA  AA YHQ++LRA+
Sbjct:  253 PFIGATIAAFYHQFVLRAS 271          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 1.182e-87
Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLA KVSL+RAV+YMVAQCLGA CGVGLVK F    YN  GGGAN ++ GYN G  +GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARSFGAAVIYNN KAWDD WIFWVGPF
Sbjct:   84 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPF 255          

HSP 2 Score: 33.4982 bits (75), Expect = 1.182e-87
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAAI 574
            PFVGA  AA YHQ++LRA A+
Sbjct:  254 PFVGAAIAAFYHQFVLRAGAM 274          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.422e-87
Identity = 146/171 (85.38%), Postives = 155/171 (90.64%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLIRAV Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARS G AVIYN DKAWDD WIFWVGP
Sbjct:   89 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGP 259          

HSP 2 Score: 34.6538 bits (78), Expect = 3.422e-87
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            P +GA  AAAYHQY+LRA+A
Sbjct:  259 PLIGAAIAAAYHQYVLRASA 278          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.908e-87
Identity = 146/171 (85.38%), Postives = 155/171 (90.64%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP
Sbjct:   90 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGP 260          

HSP 2 Score: 34.6538 bits (78), Expect = 9.908e-87
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            P +GA  AAAYHQY+LRA+A
Sbjct:  260 PLIGAAIAAAYHQYVLRASA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.909e-87
Identity = 146/171 (85.38%), Postives = 155/171 (90.64%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y++AQCLGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN DKAWDD WIFWVGP
Sbjct:   89 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGP 259          

HSP 2 Score: 34.6538 bits (78), Expect = 9.909e-87
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            P +GA  AAAYHQY+LRA+A
Sbjct:  259 PLIGAAIAAAYHQYVLRASA 278          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.686e-86
Identity = 147/172 (85.47%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL RA+ Y++AQCLGAICGVG VKAF    Y   GGGAN++A GY+ G+ L AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN  K WDDHWIFWVGPF
Sbjct:   85 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPF 256          

HSP 2 Score: 31.5722 bits (70), Expect = 1.686e-86
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAA 568
            PF+GA  AA YHQ++LRA+
Sbjct:  255 PFIGAAIAAFYHQFVLRAS 273          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 4.882e-86
Identity = 147/172 (85.47%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F  + Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AWDDHWIFWVGPF
Sbjct:   92 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPF 263          

HSP 2 Score: 29.261 bits (64), Expect = 4.882e-86
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YHQ ++RA
Sbjct:  262 PFIGAALAALYHQLVIRA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.308e-86
Identity = 143/172 (83.14%), Postives = 156/172 (90.70%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ Y+VAQCLGA+CGV LVK F    Y+  GGGAN +A+GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YNN KAW D WIFWVGPF
Sbjct:   84 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPF 255          

HSP 2 Score: 31.9574 bits (71), Expect = 8.308e-86
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            PF+GA  AA YHQ +LRA+A
Sbjct:  254 PFIGAAIAALYHQIVLRASA 273          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.084e-85
Identity = 146/172 (84.88%), Postives = 154/172 (89.53%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG G+VK F    Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D +WDDHWIFWVGPF
Sbjct:   93 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPF 264          

HSP 2 Score: 29.261 bits (64), Expect = 1.084e-85
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YHQ ++RA
Sbjct:  263 PFIGAALAALYHQIVIRA 280          
The following BLAST results are available for this feature:
BLAST of CK740129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
PIP22_MAIZE2.398e-8885.38Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP23_ARATH9.061e-8887.21Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP26_ARATH1.182e-8785.47Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP22_ORYSJ3.422e-8785.38Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE9.908e-8785.38Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE9.909e-8785.38Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP21_ARATH1.686e-8685.47Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP13_ARATH4.882e-8685.47Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP25_ORYSJ8.308e-8683.14Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP14_ARATH1.084e-8584.88Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6623 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740129 ID=CK740129; Name=CK740129; organism=Citrus sinensis; type=EST; length=574bp
TGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCTGGCAT
TTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAA
GGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGTGCTTG
GGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCATGAGTA
CAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAACAAAG
GATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTGTTTACACA
GTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCC
CGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGG
CCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGT
GCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGATCTT
CTGGGTTGGTCCCTTTCGTTGGAGCATTGGCTGCAGCGGCATACCACCAG
TACATCTTGAGGGCTGCTGCTATC
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