CK740129

Overview
NameCK740129
Unique NameCK740129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:351..923. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 9.082e-85
Identity = 144/171 (84.21%), Postives = 153/171 (89.47%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            WAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSL+RAV Y+VAQ LGAICGVGLVK F    Y   GGGAN ++ GY+KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN  KAW DHWIFWVGP
Sbjct:   90 WAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGP 260          

HSP 2 Score: 34.6538 bits (78), Expect = 9.082e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            P +GA  AAAYHQY+LRA+A
Sbjct:  260 PLIGAAIAAAYHQYVLRASA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 1.185e-84
Identity = 143/172 (83.14%), Postives = 154/172 (89.53%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKV+L+RAV YMVAQCLGAICGV LVKAF    +   GGGAN ++ GY+ G+ + AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN DKAWD HWIFWVGPF
Sbjct:   84 WAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPF 255          

HSP 2 Score: 33.113 bits (74), Expect = 1.185e-84
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAAI 574
            PF GA  AA YHQ++LRA AI
Sbjct:  254 PFAGAAIAAFYHQFVLRAGAI 274          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 2.016e-84
Identity = 143/172 (83.14%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F   +Y +LGGGANT+A GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N D AWDDHW+FWVGPF
Sbjct:   92 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPF 263          

HSP 2 Score: 26.5646 bits (57), Expect = 2.016e-84
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YH  ++RA
Sbjct:  262 PFIGAALAALYHVIVIRA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 3.430e-84
Identity = 143/172 (83.14%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D +WDDHW+FWVGPF
Sbjct:   92 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPF 263          

HSP 2 Score: 26.5646 bits (57), Expect = 3.430e-84
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YH  ++RA
Sbjct:  262 PFIGAALAALYHVVVIRA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 3.430e-84
Identity = 143/172 (83.14%), Postives = 155/172 (90.12%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D +WDDHW+FWVGPF
Sbjct:   92 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPF 263          

HSP 2 Score: 26.5646 bits (57), Expect = 3.430e-84
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YH  ++RA
Sbjct:  262 PFIGAALAALYHVVVIRA 279          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 4.474e-84
Identity = 141/172 (81.98%), Postives = 153/172 (88.95%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARKVSL+RA+ YM AQCLGAICGV LVK F    Y+  GGGAN +A+GY+ G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS G AV+YNN+KAW D WIFWVGPF
Sbjct:   87 WAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPF 258          

HSP 2 Score: 32.3426 bits (72), Expect = 4.474e-84
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            PF+GA  AA YHQ ILRA+A
Sbjct:  257 PFIGAAIAALYHQVILRASA 276          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 1.295e-83
Identity = 143/172 (83.14%), Postives = 152/172 (88.37%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F    Y + GGGAN VA GY KGS LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AWDDHWIFWVGPF
Sbjct:   93 WAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPF 264          

HSP 2 Score: 29.261 bits (64), Expect = 1.295e-83
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YHQ ++RA
Sbjct:  263 PFIGAALAALYHQIVIRA 280          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.690e-83
Identity = 143/172 (83.14%), Postives = 152/172 (88.37%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YM AQ LGAICGV LVK F    Y   GGGAN V++GY+ G+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAV+YNN KAW D WIFWVGPF
Sbjct:   89 WAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPF 260          

HSP 2 Score: 31.9574 bits (71), Expect = 1.690e-83
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRAAA 571
            PF+GA  AA YHQ +LRA+A
Sbjct:  259 PFIGAAIAALYHQIVLRASA 278          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 299.671 bits (766), Expect = 6.380e-83
Identity = 140/172 (81.40%), Postives = 151/172 (87.79%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            W+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK F K  Y + GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN   AWDDHWIFWVGPF
Sbjct:   94 WSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPF 265          

HSP 2 Score: 29.261 bits (64), Expect = 6.380e-83
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PF+GA  AA YHQ ++RA
Sbjct:  264 PFIGAALAAIYHQVVIRA 281          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 1.085e-82
Identity = 139/172 (80.81%), Postives = 152/172 (88.37%), Query Frame = 1
Query:    1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            W+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F +  Y   GGGAN VASGY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN D AW+DHWIFWVGPF
Sbjct:   95 WSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPF 266          

HSP 2 Score: 30.0314 bits (66), Expect = 1.085e-82
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILRA 565
            PFVGA  AA YHQ I+RA
Sbjct:  265 PFVGAALAAIYHQVIIRA 282          
The following BLAST results are available for this feature:
BLAST of CK740129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
PIP23_ORYSJ9.082e-8584.21Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH1.185e-8483.14Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP12_ARATH2.016e-8483.14Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA3.430e-8483.14Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.430e-8483.14Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP24_ORYSJ4.474e-8481.98Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH1.295e-8383.14Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE1.690e-8383.14Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP12_ORYSJ6.380e-8381.40Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ1.085e-8280.81Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6623 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740129 ID=CK740129; Name=CK740129; organism=Citrus sinensis; type=EST; length=574bp
TGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCTGGCAT
TTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAA
GGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGTGCTTG
GGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCATGAGTA
CAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAACAAAG
GATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTGTTTACACA
GTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCC
CGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGG
CCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGT
GCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGATCTT
CTGGGTTGGTCCCTTTCGTTGGAGCATTGGCTGCAGCGGCATACCACCAG
TACATCTTGAGGGCTGCTGCTATC
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