CK740129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.222e-23 Identity = 65/165 (39.39%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 25 VLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516 V V ISGGH+NPA+TFG L ++SLIRA+ Y +AQ LGA+ L++ + +ASG A+ E TF L+Y ++ DPKR HV +APL +GF + LA P G G+NPAR FG A++ W HW++W+GPF Sbjct: 76 VAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRL----TTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPF 229
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.903e-23 Identity = 68/166 (40.96%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 19 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +FV V A ISGGH+NPAVT GL + ++LI Y +AQCLG+I L+ F+ N + V++G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + WI+WVGP Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGP 221
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.903e-23 Identity = 70/166 (42.17%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 19 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +FV V A ISGGH+NPAVTFGL L +++++ V Y +AQ LGAI G LV+ + G SG + EII TF LVYTV+ +A DPK+ + + +AP+ IGF V L P +G +NPARSFG AV + + + WI+WVGP Sbjct: 68 LFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGP 220
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.903e-23 Identity = 68/166 (40.96%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 19 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +FV V A ISGGH+NPAVT GL + +++I Y +AQCLG+I L+ F+ N + VA+G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV+ + + WI+WVGP Sbjct: 67 LFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVFVT---NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGP 221
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.791e-23 Identity = 62/170 (36.47%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA+ G ++ + NT+ +G + A EI T V +F+ D +R+ R V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP Sbjct: 47 AFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGP 208
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.951e-23 Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 19 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +F V + +SGGH+NPAV+FG + ++S+IRAV Y +AQ LG+I +++ N++ V+ G G E++ TF L+YTV+ +A DPKR A V +APL IG V L P G +NPA +FG +++ W HWIFWVGP Sbjct: 69 LFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVT----NNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGP 223
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.951e-23 Identity = 62/170 (36.47%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 AFG ++ +V +SG HINPAVTF + ++SL RA+ Y+ AQ LGA+ G ++ NT+ G + G A EI T V +F+ D +R+ R V L IGF++ + HL + TG +NPARSF AV+ N + +HW++WVGP Sbjct: 47 AFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGP 208
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.445e-23 Identity = 61/170 (35.88%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA+ G ++ + NT+ + G A EI T V +F+ D +R+ + V L +GF++ + HL + TG G+NPARSF A++ N + +HW++WVGP Sbjct: 47 AFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGP 208
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 25 VLVYCTAG-ISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 V V +AG ISGGH+NPAVT GL L +S+ RA Y + Q L + L + + +G +T+ASG + + EII TF L++TV++ DPK+ + D P+L GF V LA +G +NPARSFG A++ N W DHW++WVGP Sbjct: 64 VAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFL----LSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGP 217
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 19 IFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANT-VASGYNKGSALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +FV V A ISGGH+NPAVTFGL + ++++ + Y VAQ LGA L+ +Y + G T SG ++ + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA P +G +NPARSFG AV N + +W++WVGP Sbjct: 67 LFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLL------QYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGP 220 The following BLAST results are available for this feature:
BLAST of CK740129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740129 ID=CK740129; Name=CK740129; organism=Citrus sinensis; type=EST; length=574bpback to top |