CK740326

Overview
NameCK740326
Unique NameCK740326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2264 contig Csv1_Contig2264:281..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.088e-40
Identity = 64/97 (65.98%), Postives = 81/97 (83.51%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375
            F+L + F E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDVAA+LTSIQSLL DPN  S AN EA+ ++ +N++EYH+RVRE VE+SW
Sbjct:   53 FRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSW 149

HSP 2 Score: 37.3502 bits (85), Expect = 1.088e-40
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M WNAVI GP DTP++ GT
Sbjct:   27 SPVPDNVMTWNAVIIGPADTPFEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.402e-40
Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375
            F+L L+F EDYPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW
Sbjct:   53 FRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149

HSP 2 Score: 37.3502 bits (85), Expect = 2.402e-40
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M+WNA+I GP DTP++ GT
Sbjct:   27 SPLPDNVMVWNAMIIGPADTPYEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.403e-40
Identity = 66/100 (66.00%), Postives = 83/100 (83.00%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384
            F+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:   53 FRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSWEDD 152

HSP 2 Score: 37.7354 bits (86), Expect = 2.403e-40
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M+WNA+I GP DTP++ GT
Sbjct:   27 SPLPDNVMIWNAMIIGPADTPYEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.127e-40
Identity = 66/100 (66.00%), Postives = 83/100 (83.00%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384
            F+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:   53 FRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152

HSP 2 Score: 37.3502 bits (85), Expect = 3.127e-40
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M+WNA+I GP DTP++ GT
Sbjct:   27 SPLPDNVMVWNAMIIGPADTPYEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.128e-40
Identity = 66/100 (66.00%), Postives = 83/100 (83.00%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384
            F+L L+F E+YPNKPP V+F+S MFHPN+YA+G ICLDILQN+W+P YDVA+ILTSIQSL  DPNP SPAN EAA +F ++K +Y +RV+E VE+SW  D
Sbjct:   53 FRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDD 152

HSP 2 Score: 37.3502 bits (85), Expect = 3.128e-40
Identity = 13/26 (50.00%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M+WNA+I GP DTP++ GT
Sbjct:   27 SPLPDNVMVWNAMIIGPADTPYEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.313e-40
Identity = 65/100 (65.00%), Postives = 82/100 (82.00%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384
            F+L LQF E YPNKPP+V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTSIQSLL DPN +SPAN EAA ++ +++ +Y +RVRE VE SW  D
Sbjct:   53 FRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNED 152

HSP 2 Score: 36.965 bits (84), Expect = 5.313e-40
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M WNAVI GP DTP++ GT
Sbjct:   27 SPLPDNVMSWNAVIIGPADTPFEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.938e-40
Identity = 64/97 (65.98%), Postives = 81/97 (83.51%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375
            F+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ ++ +N++EY +RVRE VE+SW
Sbjct:   53 FRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149

HSP 2 Score: 36.965 bits (84), Expect = 6.938e-40
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M WNAVI GP DTP++ GT
Sbjct:   27 SPVADNVMTWNAVIIGPADTPFEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.039e-40
Identity = 64/97 (65.98%), Postives = 81/97 (83.51%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSW 375
            F+L + F E YPNKPP V+F+S+MFHPN+Y  G +CLDILQN+WSP YDVAAILTSIQSLL DPN +SPAN EA+ ++ +N++EY +RVRE VE+SW
Sbjct:   53 FRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSW 149

HSP 2 Score: 36.965 bits (84), Expect = 9.039e-40
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M WNAVI GP DTP++ GT
Sbjct:   27 SPVADNVMTWNAVIIGPADTPFEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.605e-39
Identity = 63/98 (64.29%), Postives = 83/98 (84.69%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWT 378
            F++ LQF E YPNKPP V+FVS+MFHPN+Y+ G +CLDILQN+WSP YDVAAILTS+QSLL DPN +SPAN EA+ ++ +++++Y +RVR+ VE SWT
Sbjct:   53 FRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150

HSP 2 Score: 34.2686 bits (77), Expect = 2.605e-39
Identity = 12/26 (46.15%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  ++++ WNAVI GP +TP++ GT
Sbjct:   27 SPVADNVLTWNAVIIGPAETPFEDGT 52
[Close]
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.269e-38
Identity = 63/100 (63.00%), Postives = 79/100 (79.00%), Query Frame = 1 
Query:   85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQSWTAD 384
            F+L L F E YPNKPP V+F+S MFHPN+YA G +CLDILQN+WSP YDV++ILTS+QSLL DPN +SPAN EAA ++ +++  Y +RVRE VE SW  D
Sbjct:   53 FRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSWNDD 152

HSP 2 Score: 37.7354 bits (86), Expect = 1.269e-38
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    6 APQDNSIMLWNAVIFGPDDTPWDGGT 83
            +P  +++M WNAVI GP DTP++ GT
Sbjct:   27 SPLPDNVMKWNAVIIGPSDTPFEDGT 52
The following BLAST results are available for this feature:
BLAST of CK740326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
UBC2_NEUCR1.088e-4065.98Ubiquitin-conjugating enzyme E2 2 OS=Neurospora cr... [more]
UBC2_CANGA2.402e-4068.04Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_KLULA2.403e-4066.00Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces... [more]
UBC2_YEAST3.127e-4066.00Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_ASHGO3.128e-4066.00Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]
UBC2_DEBHA5.313e-4065.00Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC2_ASPFU6.938e-4065.98Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_EMENI9.039e-4065.98Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_YARLI2.605e-3964.29Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_CANAL1.269e-3863.00Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6470 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740326 ID=CK740326; Name=CK740326; organism=Citrus sinensis; type=EST; length=463bp
GTGGTGCTCCTCAGGACAACAGTATAATGCTTTGGAATGCTGTTATATTC
GGGCCGGATGACACCCCATGGGATGGAGGTACCGTTTAAATTGACACTTC
AGTTCACAGAGGATTATCCAAATAAGCCACCAACAGTGCGCTTTGTTTCT
CGGATGTTCCATCCAAATATTTATGCGGATGGAAGCATTTGCTTGGACAT
TCTACAAAATCAGTGGAGTCCAATTTACGATGTAGCAGCAATACTCACGT
CAATTCAGTCATTGCTTTGTGACCCAAATCCAAACTCTCCTGCAAATTCG
GAGGCAGCACGGATGTTTAGCGAGAACAAGCGTGAATACCATAGGAGAGT
ACGGGAAATTGTTGAGCAGAGTTGGACTGCTGACTAGTGGCAACTTGTTG
GAATGTAGGGAACTTCAAAAATAGTCCAATGGCTTGTTCTAAATAACATT
TAAGATTCAAAAG
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