CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 1.881e-33
Identity = 81/175 (46.29%), Postives = 102/175 (58.29%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVL 518
            +P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL  EE YPY  TD  ++C +     AA+   F  +   E  +   +   GP++VAI+A +   Q Y  G+     CS + LDHGVL
Sbjct:  114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDT-NSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVL 280          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.457e-33
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWR+KGAV  VKDQG CGSCW+FST GA+EG N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++DYPY G D G   +  K+    ++ ++  V    ++     V + P+++AI A     Q Y  G+     C  +LDHGV+
Sbjct:  137 LPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVD-GTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGI-FDGSCGTQLDHGVV 300          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.209e-33
Identity = 78/174 (44.83%), Postives = 105/174 (60.34%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGV 515
            LP   DWR+KGAV PVKDQG CGSCW+FST  A+EG N + TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+Y +  GGL +E+DYPY   +    C+  K  +   +++ +  V  ++D+     + + P++VAI A     Q Y GGV     C   LDHGV
Sbjct:  137 LPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCD--------TTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEE--GICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGV 299          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.191e-33
Identity = 81/175 (46.29%), Postives = 102/175 (58.29%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVL 518
            +P   DWREKG V  VK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL  EE YPY G +  ++C +     AA+   F  +   E  +   +   GP++VAI+A +   Q Y  G+     CS + LDHGVL
Sbjct:  114 VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRET-NSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVL 280          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.473e-33
Identity = 81/174 (46.55%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVL 518
            P   DWREKG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GGL  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +     Y  G+     CS   +DHGVL
Sbjct:  115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE--ESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVL 279          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 9.336e-33
Identity = 78/173 (45.09%), Postives = 101/173 (58.38%), Query Frame = 3
Query:   18 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICS-RRLDHGVL 518
            DWR +GAV P+K+QG CG CWSFSTTG+ EGA+F+A+G    LVSLSEQ L+DC            ++GC GGLM  AFEY +   G+  E  YPYT  D G  CKF  S I A + ++  V+   +    +   N P++VAI+A     Q Y  G+     CS  +LDHGVL
Sbjct:  116 DWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYG-------NNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED-GKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVL 280          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 9.336e-33
Identity = 81/176 (46.02%), Postives = 101/176 (57.39%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY--MQTYIGGVSC-PYICSRRLDHGVL 518
            LP   DWR+KG V PVK+Q  CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGG M  AF+Y  + GGL  EE YPY   D    CK+      A+   F+VV+  +++     V   GP++VA++A +   Q Y  G+   P   S+ LDHGVL
Sbjct:  114 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD--EICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVL 280          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 9.336e-33
Identity = 80/174 (45.98%), Postives = 102/174 (58.62%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRRL-DHGVL 518
            P ++DWR KGAV  VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y  G+S P   +CS  L DH VL
Sbjct:  272 PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVL 434          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.219e-32
Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGV 515
            +P   DWR+KGAV  VK+QGSCGSCW+FST  A+EG N + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEY +K GGL +EEDYPY+  +     + D+S+      +  V + DE  +   L  + PL+VAI+A     Q Y GGV     C   LDHGV
Sbjct:  138 VPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALA-HQPLSVAIDASGREFQFYSGGV-FDGRCGVDLDHGV 300          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.592e-32
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVL 518
            + AD DWR K  V PVKDQ  CGSCW+FS TGALEG +FL   +LVSLSEQQLVDC  +         + GC GG M SAF+Y    GG+  E  YPY   DR  +C+FD + I A       V   E+ +   +   GP++VAI+A +   Q Y  GV     CS   LDHGVL
Sbjct:  106 MAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDR--SCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVL 271          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATL1_BOVIN1.881e-3346.29Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
RD21A_ARATH2.457e-3343.68Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
XCP1_ARATH3.209e-3344.83Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATL1_PIG4.191e-3346.29Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CERAE5.473e-3346.55Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP4_DICDI9.336e-3345.09Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATL2_HUMAN9.336e-3346.02Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATF_HUMAN9.336e-3345.98Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
XCP2_ARATH1.219e-3246.24Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CYSP3_HOMAM1.592e-3246.29Digestive cysteine proteinase 3 OS=Homarus america... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
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