CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.922e-31
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWREKGAV PVK+QG CGSCW+FS    +E  N L TG++++LSEQ+LV+C            +SGCNGGLM+ AF++ +K GG+  E+DYPY   D       + +K+  S+  F  V  ++++     V + P++VAI A     Q Y  GV     C   LDHGV+
Sbjct:  141 LPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKV-VSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVV 305          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.691e-31
Identity = 72/175 (41.14%), Postives = 103/175 (58.86%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWREKG +  VKDQGSCGSCW+FS   A+E  N + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+ +K GG+  EEDYPY   +R   C ++ K+     + ++  V ++ ++     V + P+++A+ A     Q Y  G+     C   +DHGV+
Sbjct:   18 LPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPY--KERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVV 181          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 6.691e-31
Identity = 78/175 (44.57%), Postives = 102/175 (58.29%), Query Frame = 3
Query:    3 LPADFDWREKGAV-GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWR+KGAV  PVK+QG CGSCW+FS   A+EG N + TG+LVSLSEQ+LV+C            +SGCNGG+M+ AF +  + GGL  EEDYPYT  D G      +S+   S+  F  V  +++      V + P++VAI+A     Q Y  GV     C   LDHGV+
Sbjct:  155 LPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECAR-------NGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMD-GKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVV 320          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.691e-31
Identity = 76/174 (43.68%), Postives = 103/174 (59.20%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSR-RLDHGVL 518
            P ++DWR+KGAV  VK+QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y  G++ P+  +CS   +DH VL
Sbjct:  250 PPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDDYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVL 412          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 8.738e-31
Identity = 76/175 (43.43%), Postives = 98/175 (56.00%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICS-RRLDHGVL 518
            +P   DWREKG + PVKDQG CGSCW+FS TGALEG  F  TGKL+SL+EQ LVDC     P+     + GCNGG M++ F Y  + GGL  E  YPY G  +   C+++    AA+   F  +   E  +A  +   GP++VA  A  V  Q Y  G+     C    LDH +L
Sbjct:   57 IPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCS---GPQG----NEGCNGGFMDNPFRYVQENGGLDSEASYPYEG--KVKTCRYNPKYSAANDTGFVDIPSQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAML 222          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGLMREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            +P   DWREKGAV PVKDQG+CGSCW+FS  G +EG  +LA  +LVSLSEQQLV CD           + GC+GGLM  AF++ L+   G L  E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A    +Y  GV    I  ++L+HGVL
Sbjct:  126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVL 291          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30
Identity = 79/174 (45.40%), Postives = 99/174 (56.90%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGV 515
            +PA  DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLVSLSEQ+LVDCD +         + GCNGGLM+ AFE+  + GG+  E +YPY   D    C   K    A S+     V  +++      V N P++VAI+A     Q Y  GV     C   LDHGV
Sbjct:  126 VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD--GTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-SCGTELDHGV 288          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVL 518
            LP +FDWR    +  VKDQG+CGSCW+ +  G LE    +    L++LSEQQL+DCD         S +  C+GGLM++AFE  + AGGLM E DYPY GT     CK D  K A SV++    +  +E+ +   L+  GP+A+AI+A  + TY  G+   + C    L+H VL
Sbjct:  126 LPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK--GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII--HFCENLGLNHAVL 286          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30
Identity = 81/179 (45.25%), Postives = 100/179 (55.87%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL---DEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVL 518
            LP   DWRE G V PVKDQG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  E+ YPYTG D    CKF    +   V N   ++L   DE + A  LV+  P+++A   ++  + Y  GV     C      ++H VL
Sbjct:  141 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD--ETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVL 308          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.947e-30
Identity = 77/178 (43.26%), Postives = 105/178 (58.99%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGLMREEDYPYTGTDRGHACKFDKSK----IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            +P   DWREKGAV PVKDQG+CGSCW+FS  G +EG  +LA  +LVSLSEQQLV CD           + GC+GGLM  AF++ L+   G L  E+ YPY  +  G+  +   S     + A +    ++   E  +AA L KNGP+A+A++A    +Y  GV    I  ++L+HGVL
Sbjct:  126 VPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD---------DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYV-SGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVL 292          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
ORYB_ORYSJ3.922e-3141.95Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSPL_SOLLC6.691e-3141.14Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP1_ORYSJ6.691e-3144.57Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATF_MOUSE6.691e-3143.68Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATL6_HUMAN8.738e-3143.43Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
LMCPB_LEIME1.490e-3043.50Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSEP_RICCO1.490e-3045.40Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATV_NPVAH1.490e-3041.95Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
ALEU_ARATH1.490e-3045.25Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP2_LEIPI1.947e-3043.26Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
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