CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.947e-30
Identity = 78/174 (44.83%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGV 515
            +P   DWR+KGAV  VKDQG CGSCW+FST  A+EG N + T KLV+LSEQ+LVDCD E         + GCNGGLM SAFE+  + GG+  E +YPY   +    C   K + +A S+     V  +++      V N P++VAI+A     Q Y  GV     CS  L+HGV
Sbjct:  128 VPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQE--GTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTDLNHGV 290          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.542e-30
Identity = 75/175 (42.86%), Postives = 100/175 (57.14%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVL 518
            LP   DWREKG V  VK QGSCG+CW+FS  GALEG   L TGKL+SLS Q LVDC +E   E+ G  + GC GG M  AF+Y +  GG+  +  YPY  TD    C ++    AA+ + +  +   DED +   +   GP++V I+A +     Y  GV     C+  ++HGVL
Sbjct:  123 LPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNE---EKYG--NKGCGGGYMTEAFQYIIDNGGIEADASYPYKATD--EKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVL 290          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.320e-30
Identity = 75/175 (42.86%), Postives = 101/175 (57.71%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVL 518
            LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVD    C  E+ G  + GCNGG M +AF+Y +   G+  E  YPY   +    C++D  K AA+ + ++ +    ED +   +   GP++VAI+A +     Y  GV     C++ ++HGVL
Sbjct:  115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN--GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVL 281          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.337e-30
Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVL 518
            LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVDC  +         + GCNGG M  AF+Y +   G+  E  YPY  TD+   C++D    AA+ + ++ +    + +    V N GP+ V ++A +     Y  GV     C+++++HGVL
Sbjct:  115 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYG-------NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQ--KCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVL 280          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.661e-30
Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = 3
Query:   18 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            DWR+KGAV PVK+QG CGSCW+FS  G +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G +  E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+AVA++A   Q Y GGV      +  L+HGVL
Sbjct:  134 DWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGV-VSLCLAWSLNHGVL 292          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 9.661e-30
Identity = 72/169 (42.60%), Postives = 97/169 (57.40%), Query Frame = 3
Query:   18 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            DWR+KGAV PVK+QG CGSCW+FS  G +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G +  E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+AVA++A   Q Y GGV      +  L+HGVL
Sbjct:  134 DWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGV-VSLCLAWSLNHGVL 292          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.661e-30
Identity = 72/160 (45.00%), Postives = 92/160 (57.50%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYMQ--TYIGGV 473
            + AD DWR KGAV PVKDQG CGSCW+FS   ALEGA+FL TG LVSLSEQ LVDC            + GCNGG    A++Y +   G+  E  YPY   D    C++D   I A+V+++    S DE  +   +   GP++V I+A      +Y GGV
Sbjct:  106 MAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDN--CRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGV 256          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.262e-29
Identity = 82/179 (45.81%), Postives = 101/179 (56.42%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVL 518
            +P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D G  CKF    I   V    N ++ + DE + A  LV+  P++VA   V+  + Y  GV     C      ++H VL
Sbjct:  141 VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG--CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVL 308          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.795e-29
Identity = 80/179 (44.69%), Postives = 99/179 (55.31%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVL 518
            LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPY G +    CKF    +   V    N ++ + DE + A  LV+  P++VA   +   + Y  GV     C      ++H VL
Sbjct:  143 LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVL 310          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 8.179e-29
Identity = 76/176 (43.18%), Postives = 96/176 (54.55%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH---ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGV 515
            LP   DWR+KGAV  VKDQG CGSCW+FST  ++EG N + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEY    GGL+ E  YPY    RG    A     S +   +     V  + ++  A  V N P++VA+ A       Y  GV     C   LDHGV
Sbjct:  134 LPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA-RGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGE-CGTELDHGV 299          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSEP_PHAVU1.947e-3044.83Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATS_MOUSE2.542e-3042.86Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_CANFA3.320e-3042.86Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATS_SAIBB4.337e-3041.14Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
LMCPA_LEIME9.661e-3042.60Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI9.661e-3042.60Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CRUST_PANBO9.661e-3045.00Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
ALEUL_ARATH1.262e-2945.81Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CYSP2_MAIZE4.795e-2944.69Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CYSP2_HORVU8.179e-2943.18Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
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