CK932589

Overview
NameCK932589
Unique NameCK932589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1793 contig Csv1_Contig1793:145..760. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXC9_ORYSJ (Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN=GRXC9 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13
Identity = 47/114 (41.23%), Postives = 66/114 (57.89%), Query Frame = 2
Query:   74 DKEDTEMALPKAQETV----SSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWT--GQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            ++E+   A+    E V    S N+VVVFS + C  C  VK L   LGV     EL++ +  +DIQ+AL++    GQ  VP VF+GG+ +GG +   A H  G LVPLL +AGA+
Sbjct:   77 EEEEAAAAMMSVYERVARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYELDQLAAAADIQAALSQLLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLLKQAGAL 190          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:   98 LPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            + K Q+  S  S+V+FSK  C    ++K LF  LGV     EL++ + G +I+ ALA+     TVP VFIGG+ VGG +   +LH    L+P+L   GA+
Sbjct:    1 MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGAL 100          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13
Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  110 QETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            Q+ +S  SVV+FSK  C    ++K LF   GV     EL++ + G +I+ ALA+     TVP VFIGG+ VGG +   +LH    LVP+L  AGA+
Sbjct:    5 QKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGAL 100          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXC3_ORYSJ (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 2
Query:   89 EMALPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQ--------KTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            E A+ + +   S ++VVVFS + C  C +VK LF  +GV     EL+ +  G +++ ALA   G           VP VFIGGK VG  D   A H  G LVPLL EAGA+
Sbjct:   23 ESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGAL 133          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GLRX1_SCHPO (Glutaredoxin-1 OS=Schizosaccharomyces pombe GN=grx1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 2
Query:  119 VSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEA 388
            V+ N VVVF+K++CP+C + +++     +  +  +++  ++G +IQS L + TGQ+TVPN+FI  KHVGG     AL ++G+L  L   A
Sbjct:   12 VADNDVVVFAKSYCPYCHATEKVIADKKIKAQVYQIDLMNNGDEIQSYLLKKTGQRTVPNIFIHQKHVGGNSDFQALFKKGELDSLFNTA 101          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: YZ73_CAEEL (Uncharacterized monothiol glutaredoxin F10D7.3 OS=Caenorhabditis elegans GN=F10D7.3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   68 IKDKEDTEMALPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVT-FKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            +KD ED      K    V ++ V+V+SKT+CP+   +K +     +   K +EL++ +   ++Q  L +++G+ TVP +FI GK VGG D T A+  +G+L PLL +A A+
Sbjct:   30 LKDLED------KIVNDVMTHKVMVYSKTYCPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVPQLFISGKFVGGHDETKAIEEKGELRPLLEKAHAL 134          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXS8_ARATH (Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.023e-13
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:   98 LPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            + K Q+ +S  SVV+FS   C    ++K LF  LGV     EL++ + G +I+ ALA+     TVP VFIGG+ VGG +   +LH    L+P+L   GA+
Sbjct:    1 MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGAL 100          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GLRX1_PIG (Glutaredoxin-1 OS=Sus scrofa GN=GLRX PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12
Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 2
Query:   92 MALPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVT---FKAIELNKESDGSDIQSALAEWTGQKTVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            MA       +    VVVF K  CPFC   +EL  QL       + +++   SD ++IQ  L + TG +TVP VFIG + +GGC    ++H+ G+L+  L + GA+
Sbjct:    1 MAQAFVNSKIQPGKVVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVFIGKECIGGCTDLESMHKRGELLTRLQQIGAL 105          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXS8_ORYSJ (Monothiol glutaredoxin-S8 OS=Oryza sativa subsp. japonica GN=GRXS8 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 2
Query:   98 LPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQKT------------VPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            + +     S  +VVVFSK+ C    +V  L ++LGV  + +EL++E  G+D+++ALA      T            VP VFIGG+ VG  D   +LH  G LVPLL +AGA+
Sbjct:    1 MDRVTRLASQKAVVVFSKSSCGMSHAVTRLLRELGVDARVVELDEEPAGADMENALAGMLLAGTAANGGGRGRGVVVPTVFIGGRLVGSTDRVMSLHVAGGLVPLLRDAGAL 112          
BLAST of CK932589 vs. ExPASy Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 2
Query:   89 EMALPKAQETVSSNSVVVFSKTFCPFCVSVKELFQQLGVTFKAIELNKESDGSDIQSALAEWTGQK------TVPNVFIGGKHVGGCDSTTALHREGKLVPLLTEAGAV 397
            +  L + +   S ++VV+FS + C  C +VK LF+ +GV+    EL+    G DIQ AL    G        ++P VFIGGK VG  D   A H  G LVPLL +AGA+
Sbjct:   26 DTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGAL 134          
The following BLAST results are available for this feature:
BLAST of CK932589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
GRXC9_ORYSJ2.414e-1341.23Glutaredoxin-C9 OS=Oryza sativa subsp. japonica GN... [more]
GRXS7_ARATH3.152e-1340.00Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana ... [more]
GRXS5_ARATH3.152e-1342.71Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana ... [more]
GRXC3_ORYSJ4.117e-1341.44Glutaredoxin-C3 OS=Oryza sativa subsp. japonica GN... [more]
GLRX1_SCHPO4.117e-1338.89Glutaredoxin-1 OS=Schizosaccharomyces pombe GN=grx... [more]
YZ73_CAEEL5.377e-1336.04Uncharacterized monothiol glutaredoxin F10D7.3 OS=... [more]
GRXS8_ARATH7.023e-1340.00Monothiol glutaredoxin-S8 OS=Arabidopsis thaliana ... [more]
GLRX1_PIG1.198e-1236.19Glutaredoxin-1 OS=Sus scrofa GN=GLRX PE=1 SV=2[more]
GRXS8_ORYSJ2.043e-1238.39Monothiol glutaredoxin-S8 OS=Oryza sativa subsp. j... [more]
GRXC7_ARATH2.669e-1240.37Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_H12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932589 ID=CK932589; Name=CK932589; organism=Citrus sinensis; type=EST; length=616bp
GGGGAAGTTCTCTCCTTTGTAAAGCCAAAGAGGATTTGAAGCTTATTTAG
GGTTTGTGAGATTTCGAATCAAAGACAAAGAAGACACAGAAATGGCTTTG
CCCAAGGCCCAGGAAACCGTTTCCTCCAATTCCGTCGTCGTTTTCAGCAA
AACGTTTTGTCCGTTCTGCGTGAGTGTCAAAGAGCTGTTTCAGCAACTCG
GAGTCACTTTCAAGGCCATTGAACTGAACAAAGAAAGTGATGGAAGTGAC
ATTCAATCAGCTCTAGCTGAGTGGACTGGACAGAAAACTGTTCCAAATGT
CTTCATCGGAGGGAAACACGTTGGTGGCTGCGATTCAACTACTGCACTGC
ACAGGGAAGGGAAGCTGGTTCCTCTGCTCACTGAAGCTGGAGCTGTTGCC
AAGACAGCTGCCTGATGGATGGCTATTGTCTGCCTGTTAATTCTAGTAAT
AAATAAAGAATGTGTTGGTAGTGCTTAATCTGTCTGAATTAAACATGAAA
TTATGCTTATTTGAGTAATTTCCAATGCACTTTTTTGTTCAGTTTCTGTT
TTATGTTGAAATCTGTATGAATTTTATCAGATTTTTCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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