CK932608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.086e-24 Identity = 66/145 (45.52%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441 IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y+ +++ KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I A S G + N+ P +A+ GCC Sbjct: 61 IWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGERPNLKIDSTP-VKSASGGCC 201
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.086e-24 Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEAD 420 +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+GNK D E++R V K++ ARE+G F E SAK+ +NV + F L I LL G + LK N KPP D Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LLKSGGRRLKNN---NKPPSTD 188
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPSLLAEGSKGLK-----KNIFKQ--KPPEADAAASGCC 441 IWDTAGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ ++ N + +L+GNK D R VT +EG FA+E+G +F+E SA+T NV++ F +E+ KI D ++ S G+K N Q KP E AA S C Sbjct: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSC 212
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAE-----GSKGLKKNIFKQKPPEADAAASGC 438 IWDTAGQER+RT+T++YYRGA G +++YD+ +++FT + D WA +I YS + + +LVGNK D E ERVV+ ++G A + G F E SAK +NV+Q FE LV I D + E GS G + PP+ ++ GC Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQIKTYSWDNAQV-ILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGPALGDTPPPQ--PSSCGC 219
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441 IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y+ +++ KLLVGNK D +++VV FA G F+E SAK NV+Q F + +I A S G + N+ P A+ GCC Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYA-SENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGERPNLKIDSTP-VKPASGGCC 201
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441 IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ +++ KLLVGNK D +++VV +A + G F+E SAK NV+Q F + +I + + S K ++ A GCC Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYA-SENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDS-KPSVKINSSTPVSANKGGCC 205
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR +T SYYRGA G +MVYD+TRR T+ +LS +L TN + + +L+GNK D E++R VT +E FA E G LF+E SAKT NV+ F E KI Sbjct: 64 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL--TNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR +T SYYRGA G +MVYD+TRR T+ +LS +L TN + + +L+GNK D E++R VT +E FA E G LF+E SAKT NV+ F E KI Sbjct: 64 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL--TNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR +T SYYRGA G +MVYD+TRR T+ +LS +L TN + + +L+GNK D E++R VT +E FA E G LF+E SAKT NV+ F E KI Sbjct: 64 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL--TNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.724e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR +T SYYRGA G +MVYD+TRR T+ +LS +L TN + + +L+GNK D E++R VT +E FA E G LF+E SAKT NV+ F E KI Sbjct: 64 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNL--TNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172 The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bpback to top |