CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CITK8 (S-adenosylmethionine synthetase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metK PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ T K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SULDN (S-adenosylmethionine synthetase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=metK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22
Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEV 321
            TKVDRS AY  R  AK++VA+G+  R  +Q++YAIG+  P+S+ +DT+ T  + +K+I   VKE FD  P  I  +LDL R     + KTA YGHFGRE+  FTWE+
Sbjct:  275 TKVDRSAAYACRHVAKNLVAAGVCDRVTIQIAYAIGISAPVSIMIDTHNTAIVEEKKIESCVKELFDLTPKGIIKSLDLLR---PIYRKTAVYGHFGREEEGFTWEL 378          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22
Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSR----FLKTAAYGHFGREDPDFTWEVVK 327
            TKVDRS AY  R  AKS+VA+GLA R  VQ+SYAIGV  P+S+ V+ + +GK+ ++ +  +V ENFD RPG I     L+   N R    +   AAYGHFGR D +  WE V+
Sbjct:  287 TKVDRSAAYAARFVAKSLVAAGLASRVEVQLSYAIGVANPVSILVEAFGSGKMSNEALTELVTENFDLRPGAIIEQFGLRSLPNQRQGRFYRDVAAYGHFGRPDLNLPWEDVQ 399          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_LACJO (S-adenosylmethionine synthetase OS=Lactobacillus johnsonii GN=metK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            TKVDRS +Y  R  AK+IVA+GLA +C +Q++YAIGV  P+S+ VDT+ T K+ +  ++  V+  FD RP  I   L+LKR     + +TAAYGHFGR D D  WE
Sbjct:  283 TKVDRSASYAARYVAKNIVAAGLAYQCEIQLAYAIGVAHPVSIMVDTHGTSKVSEDLLVEAVRNVFDLRPAGIIEMLNLKR---PIYRQTAAYGHFGRTDVDLPWE 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CORK4 (S-adenosylmethionine synthetase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=metK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22
Identity = 56/106 (52.83%), Postives = 70/106 (66.04%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY +R  AK+IVA+GLA RC VQV+YAIG   P+ ++V+T+ T K P   I   V++ FD RP  I   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  284 SKVDRSAAYAMRWVAKNIVAAGLADRCEVQVAYAIGRANPVGLYVETFGTEKEPISAIQEAVQKVFDLRPAAIIRELDLKR---PIYAQTAAYGHFGRTDLDLPWE 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BRAJA (S-adenosylmethionine synthetase OS=Bradyrhizobium japonicum GN=metK PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR---EDPDFTWE 318
            TKVDRS AY  R  AK+IVA+GLA RC +Q++YAIGV  PLS+++DT+ TGK+P++++ +   +  D  P  I  +LDL R     + +T+AYGHFGR    +  F+WE
Sbjct:  281 TKVDRSAAYAARYVAKNIVAAGLADRCTLQLAYAIGVARPLSIYIDTHGTGKVPEEQLEKAAAQAMDLTPRGIRSHLDLNR---PIYARTSAYGHFGRTPDNEGGFSWE 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++T+ T KIP   +  +V+E FD RP  +   LDL +     + +TAAYGHFGRE   F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLAERCEIQVSYAIGVAEPTSITIETFGTEKIPADNLTALVREFFDLRPHGLITMLDLLQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SHESW (S-adenosylmethionine synthetase OS=Shewanella sp. (strain W3-18-1) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22
Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++T+ TGK+ ++ ++++V+++FD RP  +   L+L R     +  TAAYGHFGR   +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_SHEPC (S-adenosylmethionine synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=metK PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22
Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 318
            +KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ ++T+ TGK+ ++ ++++V+++FD RP  +   L+L R     +  TAAYGHFGR   +F WE
Sbjct:  269 SKVDRSAAYAARYVAKNIVAAGLADRCELQVSYAIGVAEPTSISIETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 369          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECO243.735e-2252.83S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_CITK83.735e-2252.83S-adenosylmethionine synthetase OS=Citrobacter kos... [more]
METK_SULDN4.879e-2248.60S-adenosylmethionine synthetase OS=Sulfurimonas de... [more]
METK_PROMA4.879e-2248.67S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LACJO4.879e-2250.00S-adenosylmethionine synthetase OS=Lactobacillus j... [more]
METK_CORK44.879e-2252.83S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BRAJA4.879e-2247.71S-adenosylmethionine synthetase OS=Bradyrhizobium ... [more]
METK_SODGM6.372e-2252.83S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SHESW6.372e-2250.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHEPC6.372e-2250.00S-adenosylmethionine synthetase OS=Shewanella putr... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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