CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 6.533e-51
Identity = 108/165 (65.45%), Postives = 114/165 (69.09%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAA------------------------------------------------YGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD+EIL+IVKE FDFRPGMI+INLDLKRGGN RFLKTAA                                                YGHFGR+DPDFTWEVVKPLK+EKPQ
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 440          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVDT++TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAA GH GR+DPDFTWE VK LK
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50
Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK LK
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVLK 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.223e-50
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDF+WE VK LK
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.433e-50
Identity = 94/111 (84.68%), Postives = 103/111 (92.79%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPL 333
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK L
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.101e-49
Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGMIAINLDL RGGN R+ KTAAYGHFGR++ DFTWE VK LK
Sbjct:  276 TKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.986e-49
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPL 333
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IP K++L ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPDFTWE VK L
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL 386          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.264e-46
Identity = 85/112 (75.89%), Postives = 100/112 (89.29%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLK 336
            TKVDRSGAYI RQAAKS+VASGLA+RC+VQVSY+I V EPLSVFVDTY TG +PD EIL++++++FDFRPG+I  NLDLKRGGN R+ KTAAYGHFGR+DPDFTWE VK L+
Sbjct:  279 TKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 8.850e-40
Identity = 82/112 (73.21%), Postives = 91/112 (81.25%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD-FTWEVVKPL 333
            TKVDRSGAYI RQ AKSIVA+GLARR + Q+SYAIGV +PLS+ VDTY +GKIPD EIL  VKE FDFR GMI  +LDLKRGGN R+  TAAYGHFGR+D D FTWE V PL
Sbjct:  275 TKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTDVFTWEKVVPL 386          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_DAUCA6.533e-5165.45S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK3_SOLLC4.234e-5084.82S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK3_CATRO4.234e-5084.82S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_SOLTU4.234e-5084.82S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_TOBAC7.223e-5083.93S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY9.433e-5084.68S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK2_TOBAC2.101e-4983.93S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PETHY7.986e-4982.88S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK_CHLRE8.264e-4675.89S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTTA8.850e-4073.21S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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