CK934072

Overview
NameCK934072
Unique NameCK934072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length544
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 1.962e-55
Identity = 102/117 (87.18%), Postives = 112/117 (95.73%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.347e-55
Identity = 104/110 (94.55%), Postives = 108/110 (98.18%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKP 330
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSV+VDTY TGKIPDKEIL+IVKENFDFRPGMI INLDLKRGGNSRFLKTAAYGHFGR+DPDFTWEVVKP
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKP 385          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.347e-55
Identity = 102/117 (87.18%), Postives = 112/117 (95.73%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.347e-55
Identity = 102/117 (87.18%), Postives = 112/117 (95.73%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.347e-55
Identity = 102/117 (87.18%), Postives = 112/117 (95.73%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK++KPQ
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQ 392          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.347e-55
Identity = 104/115 (90.43%), Postives = 111/115 (96.52%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 345
            TKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDK+IL+IVKENFDFRPGMI+INLDLKRGGN+RF KTAAYGHFGR+DPDFTWE VKPLK+EK
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEK 390          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.372e-55
Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 348
            TKVDRSGAY+ RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG  R+LKTAAYGHFGRE  DFTWEVVKPLK+EKP
Sbjct:  279 TKVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGADFTWEVVKPLKWEKP 394          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.372e-55
Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKPQ 351
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+D DFTWEVVKPLK  K Q
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQ 392          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.710e-55
Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEKP 348
            TKVDRSGAYI RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG+ R+LKTAAYGHFGR+  DFTWEVVKPLK+EKP
Sbjct:  279 TKVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEKP 394          
BLAST of CK934072 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 7.457e-55
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKYEK 345
            TKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGM++INLDLKRGGN RF KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMMSINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
The following BLAST results are available for this feature:
BLAST of CK934072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_ARATH1.962e-5587.18S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_CARPA3.347e-5594.55S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK_BRARP3.347e-5587.18S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU3.347e-5587.18S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU3.347e-5587.18S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_SUASA3.347e-5590.43S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK_WHEAT4.372e-5589.66S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK2_BRAJU4.372e-5590.60S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK4_HORVU5.710e-5589.66S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_BETVU7.457e-5590.43S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934072 ID=CK934072; Name=CK934072; organism=Citrus sinensis; type=EST; length=544bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACTTCACATGGGAGGTGGTGAAGCCCCTCAAGTATGAGAAACCCCA
AGAGTAGTATTTAAGTATGCAGTTTCATTCTTTGTTTGAACTTAATAATT
TACTTGTTCTTTCGTCTGCCTGTCAGATTCTGTCTTTTTTCTCTCTTGGT
CTTGGCCTTTTTTTTTATAAATAAATTTGTATTATCTTTGCCATAATAGA
AAGATATATGTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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