CK934082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.573e-30 Identity = 66/123 (53.66%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 404 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 KTFP +P T EVI VAEG+ ED+D+AV A+ AF G PW +M +R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG T+P DG T HE Sbjct: 54 KTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHE 176
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 7.758e-28 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 G+ FPVY+P T E + V E D DID+AV AR AF G W +M ER R++ + ADL+E++ LA +E+ N GKP++Q+ ++ V++ YYAGWADKIHG+T+P DG T HE Sbjct: 52 GRVFPVYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHE 175 HSP 2 Score: 24.2534 bits (51), Expect = 7.758e-28 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 252 PPVQISYTKNLINGQFVDAASGKM 323 P ++I YTK IN ++ ++ SG++ Sbjct: 31 PNLEIKYTKIFINNEWQNSESGRV 54
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 2.900e-27 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 G+ FPV +P T E + V E D DID+AV AR AF G W +M ER R++ + ADL+E++ LA +E+ N GKP++Q+ ++ V++ L YYAGWADKIHG+T+P DG T HE Sbjct: 52 GRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHE 175 HSP 2 Score: 24.2534 bits (51), Expect = 2.900e-27 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 252 PPVQISYTKNLINGQFVDAASGKM 323 P ++I YTK IN ++ ++ SG++ Sbjct: 31 PNLEIKYTKIFINNEWQNSESGRV 54
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 2.900e-27 Identity = 57/124 (45.97%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 G+ FPV +P T E + V E D DID+AV AR AF G W +M ER R++ + ADL+E++ LA +E+ N GKP++Q+ ++ V++ L YYAGWADKIHG+T+P DG T HE Sbjct: 52 GRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHE 175 HSP 2 Score: 24.2534 bits (51), Expect = 2.900e-27 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 252 PPVQISYTKNLINGQFVDAASGKM 323 P ++I YTK IN ++ ++ SG++ Sbjct: 31 PNLEIKYTKIFINNEWQNSESGRV 54
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.405e-27 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 404 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 KTFP +P T EVI +VAEGD D+DRAV AR+AF G PW +M ER R++ ADL+E++ LA+LET +NGKP+ +S ++ V+++ Y+AGWADK HG T+P DG T HE Sbjct: 52 KTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNLLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHE 174
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.447e-27 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 404 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 KTFP +P T EVI +VAEGD D+DRAV AR+AF G PW +M ER R++ ADL+E++ LA+LET +NGKP+ +S ++ V+++ Y+AGWADK HG T+P DG T HE Sbjct: 52 KTFPTVNPTTGEVIGHVAEGDRADVDRAVKAAREAFRLGSPWRRMDASERGRLLNCLADLVERDRVYLASLETLDNGKPFQESYALDLDEVIKVYRYFAGWADKWHGKTIPMDGQHFCFTRHE 174
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.447e-27 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 404 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 KTFP +P T EVI +VAEGD D+D AV AR+AF G PW +M ER R++ R ADL+E++ LA+LET +NGKP+ +S ++ V+++ Y+AGWADK HG T+P DG T HE Sbjct: 54 KTFPTVNPTTGEVIGHVAEGDRADVDLAVKAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHE 176
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 2 Query: 404 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 KTFP +P T EVI +VAEGD D+D AV AR+AF G PW +M ER R++ R ADL+E++ LA+LET +NGKP+ +S ++ V+++ Y AGWADK HG T+P DG T HE Sbjct: 54 KTFPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDGEHFCFTRHE 176
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.837e-26 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 G+ FPVY+P T E I ++ E D D D+AV AR AF G W +M ER ++ + ADL+E++ LA +E+ N+GKP++Q+ ++ V++ L YYAGWADKIHG+T+P DG T HE Sbjct: 52 GRIFPVYNPATGEQICDIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHE 175 HSP 2 Score: 22.3274 bits (46), Expect = 1.837e-26 Identity = 8/22 (36.36%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 258 VQISYTKNLINGQFVDAASGKM 323 ++I YTK IN ++ ++ SG++ Sbjct: 33 LEIKYTKIFINNEWQNSESGRI 54
BLAST of CK934082 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.837e-26 Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 401 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGXXHIQTLHE 769 GK FPV++P T E + V EGD D+D+AV AR+AF G PW M ER R++ + ADLIE++ LA +E+ N GK Y + +++ ++ L Y AGWADKI G T+P DG T HE Sbjct: 35 GKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHE 158 HSP 2 Score: 28.1054 bits (61), Expect = 1.837e-26 Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 219 STAAVVEEPIIPP-VQISYTKNLINGQFVDAASGK 320 S++ + P++P ++I YTK IN ++ D+ SGK Sbjct: 2 SSSGTSDLPVLPTDLKIQYTKIFINNEWHDSVSGK 36 The following BLAST results are available for this feature:
BLAST of CK934082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 207
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934082 ID=CK934082; Name=CK934082; organism=Citrus sinensis; type=EST; length=769bpback to top |