CK934442

Overview
NameCK934442
Unique NameCK934442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6234 contig Csv1_Contig6234:63..595. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD6_DANRE (Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio GN=acbd6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.869e-13
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 2
Query:   50 LQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEE 298
            L+ EFE  A++ + L ++ + E  L LY  +KQ  VG  NT++PG F+   + KW AWK +   S E+AM +Y+T V  L  E
Sbjct:   60 LENEFESAADRVRDLVQTASREQLLYLYARFKQVKVGKCNTSKPGFFDFEGQRKWSAWKQLGDMSAEQAMQEYVTCVHALDPE 142          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD6_XENTR (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 2
Query:   20 EKNKRKGEMGLQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEE 298
            E+   K E  LQ +FE+ A+  + +    + E  L LY  YKQ  VG  NT +PG F+   + KW+AWKA+   S ++AM++YI  VK+L  +
Sbjct:   22 EQWDEKTEEELQGQFEQAAKHVQNVASVASTEQLLFLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSCQQAMNEYIETVKKLDPD 114          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD6_XENLA (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis GN=acbd6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.513e-12
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 2
Query:   29 KRKGEMGLQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEE 298
            + K E  LQ +FE+ A+  + +    + E  L LY  YKQ  VG  NT +PG F+   + KW+AWKA+   S ++AM++YI  VK+L  +
Sbjct:   25 EEKTEEELQCQFEQAAKHVQNVASVASTEQLLYLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSHQQAMTEYIETVKKLDPD 114          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBP_MANSE (Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.749e-12
Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 2
Query:   44 MGLQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVN-TNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEEAGV 307
            M LQE+F++ A   + L    ++ + L LY L+KQA+ G  +  NRPG+ +++ +AK+DAW    G SKE+A   YI KV+ L    G+
Sbjct:    1 MSLQEQFDQAASNVRNLKSLPSDNDLLELYALFKQASAGDADPANRPGLLDLKGKAKFDAWHKKAGLSKEDAQKAYIAKVESLIASLGL 89          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBP2_DIGLA (Acyl-CoA-binding protein 2 (Fragment) OS=Digitalis lanata PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 9.806e-12
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 2
Query:   50 LQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPV 166
            L+EEFEEHAEKAKTLPE+T++ENKL LYGLYKQATVG V
Sbjct:    2 LKEEFEEHAEKAKTLPENTSSENKLTLYGLYKQATVGNV 40          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD5_XENTR (Acyl-CoA-binding domain-containing protein 5 OS=Xenopus tropicalis GN=acbd5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.806e-12
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 2
Query:   53 QEEFEEHAEKAKTLPES----TTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEEAGVS 310
            Q  FE      ++LP++     +NE  L  Y  YKQAT+GP NT RPG ++   R KWDAW ++   SKE+AM  Y+ ++K++ E   V+
Sbjct:    9 QTRFEAAVSVIQSLPKNGSFQPSNEMMLKFYSFYKQATLGPCNTPRPGFWDPVGRYKWDAWNSLGDMSKEDAMIAYVDEMKKILETMPVT 98          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD6_BOVIN (Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 2
Query:   29 KRKGEMGLQEEFEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 289
            K +    L E FE+ AE  + L +  + E  L LY  YKQ  VG  NT +P  F+   + KW+AWKA+   S  +AM +YI  VK+L
Sbjct:   35 KIEASRSLPELFEKAAEHLQGLVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKL 121          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD5_XENLA (Acyl-CoA-binding domain-containing protein 5 OS=Xenopus laevis GN=acbd5 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.281e-11
Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 2
Query:   53 QEEFEEHAEKAKTLPES----TTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQEEAGVS 310
            Q  FE      ++LP++     +NE  L  Y  YKQAT+GP NT RPG ++   R KWDAW ++   SKE+AM  Y+ ++K++ E   V+
Sbjct:    9 QTRFEAAVSVIQSLPKNGSFQPSNEMMLKFYSFYKQATLGPCNTARPGFWDPVGRYKWDAWNSLGDMSKEDAMIAYVDEMKKIIETMPVT 98          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBD5_CHICK (Acyl-CoA-binding domain-containing protein 5 OS=Gallus gallus GN=ACBD5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.184e-11
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   62 FEEHAEKAKTLPES----TTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLQE 295
            FE   +  ++LP++     TNE  L  Y  YKQAT GP N  RPG ++   R KWDAW A+   SKEEAM  Y+ ++K++ E
Sbjct:   12 FEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATQGPCNIPRPGFWDPIGRYKWDAWSALGDMSKEEAMIAYVEEMKKILE 93          
BLAST of CK934442 vs. ExPASy Swiss-Prot
Match: ACBP_DICDI (Acyl-CoA-binding protein OS=Dictyostelium discoideum GN=acbA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.853e-11
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 2
Query:   62 FEEHAEKAKTLPESTTNENKLILYGLYKQATVGPVNTNRPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 289
            FEE A+K K   +  +N+  L LYGLYKQ T G  N + P    +  +AK++AW A++G SKE+A + Y+   +QL
Sbjct:    4 FEEAAQKVKEFTKKPSNDELLSLYGLYKQGTDGDCNISEPWAVQVEAKAKYNAWNALKGTSKEDAKAKYVALYEQL 79          
The following BLAST results are available for this feature:
BLAST of CK934442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
ACBD6_DANRE8.869e-1339.76Acyl-CoA-binding domain-containing protein 6 OS=Da... [more]
ACBD6_XENTR1.158e-1238.71Acyl-CoA-binding domain-containing protein 6 OS=Xe... [more]
ACBD6_XENLA1.513e-1238.89Acyl-CoA-binding domain-containing protein 6 OS=Xe... [more]
ACBP_MANSE5.749e-1239.33Acyl-CoA-binding protein homolog OS=Manduca sexta ... [more]
ACBP2_DIGLA9.806e-1284.62Acyl-CoA-binding protein 2 (Fragment) OS=Digitalis... [more]
ACBD5_XENTR9.806e-1240.00Acyl-CoA-binding domain-containing protein 5 OS=Xe... [more]
ACBD6_BOVIN1.281e-1140.23Acyl-CoA-binding domain-containing protein 6 OS=Bo... [more]
ACBD5_XENLA1.281e-1140.00Acyl-CoA-binding domain-containing protein 5 OS=Xe... [more]
ACBD5_CHICK2.184e-1143.90Acyl-CoA-binding domain-containing protein 5 OS=Ga... [more]
ACBP_DICDI2.853e-1142.11Acyl-CoA-binding protein OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_A06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934442 ID=CK934442; Name=CK934442; organism=Citrus sinensis; type=EST; length=533bp
GGGGAATTCNNNAATCTCAGAGAAAAACAAAAGAAAGGGGGAAATGGGTT
TGCAGGAGGAATTTGAGGAGCATGCTGAGAAAGCAAAGACCCTGCCAGAG
TCGACAACAAACGAAAACAAGCTTATCCTTTATGGTCTCTACAAGCAAGC
CACTGTTGGACCAGTAAACACAAACAGACCTGGAATGTTTAACATGAGGG
ACAGAGCTAAGTGGGATGCATGGAAGGCTGTCGAAGGGAAATCTAAGGAG
GAAGCAATGAGTGACTACATTACCAAGGTAAAGCAGTTGCAGGAGGAAGC
TGGTGTTTCTGCCTGACCTTCCGCTGTATGCTTATCTTCCAAATCTCATG
ATTCGGAGAAGTCAAAATAAGTTGAAAAAGGTTTAAGCTGTTTGCAAACT
GGTTCTATTGATGTTACATCTGAATTATGTCTCTGTTTAAATTATGTATG
ATATGTACTTTGGTTAAAGTCCATTGAAATGATTAAGTAGTTTGCGTTAT
CTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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