CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP1_YEAST (ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae GN=DBP1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.545e-29 Identity = 87/234 (37.18%), Postives = 116/234 (49.57%), Query Frame = 1 Query: 238 RSTYVPPHLRNKQPASFEPPAPSREAHEPAS-----GPRWGGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVN------PFGDDIDAE----QPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA-----RTVYPLALILAPTRELSSQIHDEA 879 +S+YVPPHLR++ SFE P +E R G F R VN P ++AE + ++GI FD Y++IPV+ SG++VP P+ F+ L E L NI+ + KPTPVQ+++IPI GRDLMACAQTGSGKT F FP+ + + R P A R YP AL+LAPTREL++QI +EA Sbjct: 24 KSSYVPPHLRSRGKPSFERSTPKQEDKVTGGDFFRRAGRQTGNNGGFFGFSKERNGGTSANYNRGGSSNYKSSGNRWVNGKHIPGPKNAKLEAELFGVHDDPDYHSSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEA 257
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_SCLS1 (ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29 Identity = 70/132 (53.03%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA-------RTVYPLALILAPTRELSSQIHDEA 879 + TGINF+ Y+DIPVE SG++VP PV F L + L NI Y PTPVQ+++IPI + GRDLMACAQTGSGKT F FPI+S + P A R YP +LILAPTREL SQI DE+ Sbjct: 160 QQTGINFEKYDDIPVEASGQDVPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFQTGPSPIPANAAGSFGRTRKAYPTSLILAPTRELVSQIFDES 291
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_CHAGB (ATP-dependent RNA helicase DED1 OS=Chaetomium globosum GN=DED1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.018e-29 Identity = 71/135 (52.59%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR----------GARTVYPLALILAPTRELSSQIHDEA 879 ++TGINF+ Y+DIPV SG +VP PV TF+ L L NI +Y PTPVQ+++IPI + GRDLMACAQTGSGKT F FP IM + + Q P R YP ALILAPTREL SQI++EA Sbjct: 172 QHTGINFEKYDDIPVNPSGRDVPEPVLTFSNPPLDAHLLSNIELARYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFP----IMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEA 302
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_YEAST (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae GN=DED1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-----ARTVYPLALILAPTRELSSQIHDEA 879 +++GINFD Y+DIPV+ SG++VP P+ F L L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT F FP++S + +P R YP A+I+APTREL++QI DEA Sbjct: 116 QSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEA 245
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_YEAS7 (ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DED1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-----ARTVYPLALILAPTRELSSQIHDEA 879 +++GINFD Y+DIPV+ SG++VP P+ F L L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT F FP++S + +P R YP A+I+APTREL++QI DEA Sbjct: 116 QSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEA 245
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.496e-29 Identity = 67/123 (54.47%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 538 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIM---------REQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 DIPVE SGE+VPPP + F L E + N+ RC Y PTPVQR+++PI++AGRDLMACAQTGSGKTAAFC P++SG++ RE+ A+ P AL+LAPTREL++QI++EA Sbjct: 69 DIPVEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAK---PRALVLAPTRELAAQINEEA 188
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_PHANO (ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum GN=DED1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.496e-29 Identity = 69/132 (52.27%), Postives = 82/132 (62.12%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-------ARTVYPLALILAPTRELSSQIHDEA 879 + TGINF+ Y+DIPVE SG+ VP PV F L + L NI Y PTPVQ+++IPI + GRDLMACAQTGSGKT F FPI++ + P R YP +LILAPTREL SQI DEA Sbjct: 175 QQTGINFEKYDDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILAQAFQNGPSPPPTAQAGGYGRQRKAYPTSLILAPTRELVSQIFDEA 306
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_VANPO (ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.873e-29 Identity = 70/148 (47.30%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 451 EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGAR-----TVYPLALILAPTRELSSQIHDEA 879 EV FG D + +++GINFD Y+DIPV+ SG +VP + F L L NI ++ KPTPVQ++++PI GRDLMACAQTGSGKT F FP++S + P AR YP AL+LAPTREL++QI+DEA Sbjct: 121 EVQLFGTPEDPQ-----FQSSGINFDNYDDIPVDASGTDVPEAITEFTSPPLDALLLENIILARFTKPTPVQKYSVPIVSRGRDLMACAQTGSGKTGGFLFPVLSESFKNGPSPMPESARKSFVKKAYPTALVLAPTRELATQIYDEA 263
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_RANLE (Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.002e-28 Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 511 TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 TGINFD Y+DI VE SG +VPP + TF E +L + L N+ + YVK TP+Q+H+IPI VAGRDLMACAQTGSGKTAAF PI++ +M + V+ P A+I+APTREL +QI+ +A Sbjct: 262 TGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLM-VKGVESSAFQTLKEPEAIIVAPTRELINQIYLDA 383
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_AJECN (ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DED1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.308e-28 Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIM--REQYVQRPRG---ARTVYPLALILAPTRELSSQIHDEA 879 ++TGINF Y+ IPVE SG +VP + F L E L NI +Y PTPVQ+++IPI + GRDLMACAQTGSGKT F FPI+S + R + RG + YP ALIL PTREL SQI+DEA Sbjct: 177 QHTGINFSNYDSIPVEASGHDVPESITAFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELVSQIYDEA 306 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |