CK934523

Overview
NameCK934523
Unique NameCK934523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX3_DICDI (Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum GN=ddx3 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.680e-32
Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 1
Query:  475 IDAEQPFAEA------ENTGINFDAYED--IPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ-----RPRGARTVYPLALILAPTRELSSQIHDEA 879
            ID E+  AE       +N GI+F+AY+D  I +ETS E++  P+N+FA++DLG+ L  NI+  KY KPTPVQ+ A+PI +  RDLMACAQTGSGKTAAF FPIISGI+ +   +     +P   R   P AL+LAPTREL+ QI DEA
Sbjct:  204 IDLEEHKAEEIFKKNDDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEA 350          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_USTMA (ATP-dependent RNA helicase DED1 OS=Ustilago maydis GN=DED1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.264e-31
Identity = 100/280 (35.71%), Postives = 124/280 (44.29%), Query Frame = 1
Query:  175 ADSVSASENAAPASFNTNSLPRSTYVPPHLRNKQP--------ASFEPPAPSR---------EAHEPAS-------------GPRWGGG--PRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREV----NP-FGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE--------QYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879
            AD  S   N +  +      PR  YVPPHLR++Q         ASF P AP+            + PA+              PR G G    P                             + V    NP    ++  E+     ++ GINFD Y DIPVE +G +VP PV TF    +   L  NI+  +Y  PTPVQ+++IPI   GRDLM CAQTGSGKT  F FPI+S +           +  Q     R  YP  LILAPTREL SQIHDEA
Sbjct:   16 ADIESRFANMSVQNGAAGGAPRKAYVPPHLRSQQQPASLNSSAASFSPRAPAAFNGNGNSNGNGNGPAAPAAPAAFQSFNRGAPRGGAGGWDAPSSGGYGGARNGGGYGGGARNDGFGQWKDGKHVPGPHNPRLQKELFGEEGDGLHQSMGINFDKYGDIPVEATGRDVPEPVTTFTSPPIDAHLLENIKLARYTNPTPVQKYSIPIIKLGRDLMGCAQTGSGKTGGFLFPILSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTRELVSQIHDEA 295          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_ASHGO (ATP-dependent RNA helicase DED1 OS=Ashbya gossypii GN=DED1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.264e-31
Identity = 87/243 (35.80%), Postives = 119/243 (48.97%), Query Frame = 1
Query:  214 SFNTNSLPRSTYVPPHLRNKQPASFEPPAPSREAHEPASGPRWGGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAE------------QPFAEAEN-----TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA----RTVYPLALILAPTRELSSQIHDEA 879
            S   ++  +S YVPPH++ +       P+ SR      +G R+GG     F                              + FG  +D +            Q F   E+     +GINFD Y+DIPV+ SGE+VP P+  F    L E L  NI+  ++ KPTPVQ++++PI   GRDLMACAQTGSGKT  F FP++S          P  +    R  YP A++LAPTREL++QI DEA
Sbjct:   12 SVGDSAQKKSAYVPPHVKRRMKEGGSEPS-SRNTENFGNGGRFGGSEHNGFGGGRGSWFGGNARGGGPRSSDRGGS-----SRFGKWVDGKHVPMKRNEKLEVQLFGTPEDPNFQSSGINFDNYDDIPVDASGEDVPDPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEA 248          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_ASPOR (ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae GN=ded1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.156e-31
Identity = 74/134 (55.22%), Postives = 85/134 (63.43%), Query Frame = 1
Query:  505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA---------RTVYPLALILAPTRELSSQIHDEA 879
            +NTGINF  Y+DIPVE SG+NVP PVN F    L + L  NI    Y  PTPVQ+++IPI + GRDLMACAQTGSGKT  F FPI+S   +      P  A         R  YP +LILAPTREL SQI DEA
Sbjct:  160 QNTGINFANYDDIPVEASGQNVPEPVNAFTNPPLDDHLIANITLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRELVSQIFDEA 293          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_PICGU (ATP-dependent RNA helicase DED1 OS=Pichia guilliermondii GN=DED1 PE=3 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.816e-31
Identity = 95/260 (36.54%), Postives = 126/260 (48.46%), Query Frame = 1
Query:  190 ASENAAPASFNTNSLPRSTYVPPHLRNKQPASFEPPAPSREAHEPASGPRWGGGPRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNP----FGDDIDAE-QPFAEAE----------------NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP------RGA---RTVYPLALILAPTRELSSQIHDEA 879
            AS  AA     + S  RS YVPPHLRN+         PSR     +    +G G R DF                              N      G  +D + +P A  E                ++GINFD Y+DIPVE +G+ VP P++ F    L   +  NI+  ++ KPTPVQ++++PI  +GRDLMACAQTGSGKT  F FP++S    E Y+  P      +GA     V+P AL++APTREL SQI +EA
Sbjct:   20 ASGAAAGGETPSGSSGRSQYVPPHLRNRPNGG---STPSRRGDFGSRSNGFGSGRRGDFNSSGFQFGSGRRGNSGFGGRGGFGGGSGRYNSPKPGVGQWVDGKHEPAAPNERLEKELFGVAEDPSVQSSGINFDNYDDIPVEATGDGVPEPISAFTAPPLDPLIVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPVLS----ESYMNGPDAVPESQGAFSSHKVHPTALVMAPTRELVSQIFEEA 272          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_KLULA (ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis GN=DED1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.678e-31
Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA-----RTVYPLALILAPTRELSSQIHDEA 879
            +++GINFD Y+DIPVE SG +VP P++ F    L   L  NI+  ++ KPTPVQ++++PI  AGRDLMACAQTGSGKT  F FP++S          P  A     + VYP A+ILAPTREL++QI+DEA
Sbjct:  133 QSSGINFDNYDDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEA 262          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_DEBHA (ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii GN=DED1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.274e-31
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 1
Query:  505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GARTVYPLALILAPTRELSSQIHDEA 879
            +++GINFD Y+DIPVE SGE VP P+  F    L   L  N++  ++ KPTPVQ++++PI  AGRDLMACAQTGSGKT  F FP++S    E Y+  P           +  VYP AL++APTREL SQI DEA
Sbjct:  130 QSSGINFDNYDDIPVEASGEGVPEPITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQIFDEA 259          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_ASPTN (ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ded1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.194e-31
Identity = 72/134 (53.73%), Postives = 87/134 (64.93%), Query Frame = 1
Query:  505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA---------RTVYPLALILAPTRELSSQIHDEA 879
            ++TGINF  Y+DIPVE SG++VP PVN F    L + L  NI   +Y+ PTPVQ+++IPI + GRDLMACAQTGSGKT  F FPI+S   +      P  A         R  YP +LILAPTREL SQI DEA
Sbjct:  160 QSTGINFANYDDIPVEASGQDVPEPVNAFTNPPLDDHLISNIALARYLTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQNGPSPTPAPAGGQLGYGRQRKAYPTSLILAPTRELVSQIFDEA 293          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_ASPCL (ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus GN=ded1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.070e-30
Identity = 72/134 (53.73%), Postives = 88/134 (65.67%), Query Frame = 1
Query:  505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA---------RTVYPLALILAPTRELSSQIHDEA 879
            ++TGINF  Y+DIPVE SG++VP PVN F    L + L  NI+  +Y  PTPVQ+++IPI + GRDLMACAQTGSGKT  F FPI+S   ++     P  A         R  YP +LILAPTREL SQI DEA
Sbjct:  163 QSTGINFANYDDIPVEASGQDVPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQKGPSAVPAQASGQMSYGRQRKAYPTSLILAPTRELVSQIFDEA 296          
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_CANAL (ATP-dependent RNA helicase DED1 OS=Candida albicans GN=DED1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.398e-30
Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 1
Query:  451 EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR---------GARTVYPLALILAPTRELSSQIHDEA 879
            EV  FG   D+       +++GINFD Y+DIPVE SG+ VP P+ +F    L E L  NI+  ++ KPTPVQ++++PI  AGRDLMACAQTGSGKT  F FP++S    E Y++ P           +  VYP  L++APTREL SQI++E+
Sbjct:  147 EVELFGTADDSH-----FQSSGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEES 289          
The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
DDX3_DICDI9.680e-3253.38Probable ATP-dependent RNA helicase ddx3 OS=Dictyo... [more]
DED1_USTMA1.264e-3135.71ATP-dependent RNA helicase DED1 OS=Ustilago maydis... [more]
DED1_ASHGO1.264e-3135.80ATP-dependent RNA helicase DED1 OS=Ashbya gossypii... [more]
DED1_ASPOR2.156e-3155.22ATP-dependent RNA helicase ded1 OS=Aspergillus ory... [more]
DED1_PICGU2.816e-3136.54ATP-dependent RNA helicase DED1 OS=Pichia guillier... [more]
DED1_KLULA3.678e-3152.31ATP-dependent RNA helicase DED1 OS=Kluyveromyces l... [more]
DED1_DEBHA6.274e-3151.49ATP-dependent RNA helicase DED1 OS=Debaryomyces ha... [more]
DED1_ASPTN8.194e-3153.73ATP-dependent RNA helicase ded1 OS=Aspergillus ter... [more]
DED1_ASPCL1.070e-3053.73ATP-dependent RNA helicase ded1 OS=Aspergillus cla... [more]
DED1_CANAL1.398e-3047.37ATP-dependent RNA helicase DED1 OS=Candida albican... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bp
GCGGGGCACACGNNNAAACACCGCGAGCAACCNNNAGAAGAAGAAAAAAC
GAAGAAAGAGATTTGATTTTTGATCTGATTTTCAAACGAGGGGTTTTTGA
TCTGATAGTTAGATAGTTAGAAAGCAAACGAAAAATTTAGGGGGTAAAAT
TTTGCAATTATGAGCACATCATGGGCTGATTCAGTCTCTGCATCTGAGAA
TGCAGCCCCTGCTTCTTTTAACACCAATTCATTACCTCGATCCACTTATG
TTCCACCGCATCTCCGTAACAAGCAACCGGCCTCCTTTGAACCTCCTGCT
CCATCACGGGAAGCTCATGAACCTGCTAGTGGGCCCCGCTGGGGCGGTGG
TCCAAGGCCTGATTTTGGGCGTGGTCAGGGTTATGGTTCTGGTGGTAGAA
CTGGCGGTGGTTGGAATAATAGGAGTGGGGGGTGGGACCGAAGAGTACGT
GAAGTGAACCCGTTTGGTGATGACATTGATGCAGAGCAGCCGTTTGCTGA
AGCAGAAAACACGGGTATCAATTTTGATGCTTATGAGGATATTCCGGTGG
AGACGAGTGGGGAAAATGTGCCACCACCAGTTAATACATTTGCAGAAATA
GATCTGGGGGAAGAATTGAATCTTAATATTAGAAGGTGCAAGTACGTCAA
ACCCACCCCAGTTCAGCGTCATGCAATTCCTATATCGGTTGCTGGACGAG
ATTTAATGGCCTGTGCTCAGACAGGGTCGGGGAAGACAGCTGCCTTTTGT
TTTCCAATTATTAGTGGGATAATGCGTGAGCAGTATGTACAGAGACCACG
TGGAGCACGGACTGTTTATCCTCTGGCTCTTATTCTCGCCCCTACGAGAG
AACTCTCATCTCAGATACATGATGAAGCC
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