CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_RAT (Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus GN=Ddx4 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28 Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI +AGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+APTREL +QI+ EA Sbjct: 239 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRELINQIYLEA 370
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_MOUSE (Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus GN=Ddx4 PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28 Identity = 70/134 (52.24%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI +AGRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+APTREL +QI+ EA Sbjct: 227 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRELINQIYLEA 358
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP1_CANGA (ATP-dependent RNA helicase DBP1 OS=Candida glabrata GN=DBP1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28 Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 511 TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA-----RTVYPLALILAPTRELSSQIHDEA 879 +GINFD Y+DIPVE SG+NVP + F L E L N+ + KPTPVQ+++IPI RDLMACAQTGSGKT F FP++S + P R YP AL+LAPTREL+ QI DEA Sbjct: 114 SGINFDNYDDIPVEASGDNVPEAITEFKSPPLDELLLENVELANFSKPTPVQKYSIPIVTKNRDLMACAQTGSGKTGGFLFPVLSELFLNGPAPLPEHTRHSYMRKCYPSALVLAPTRELAIQIFDEA 241
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_CANGA (ATP-dependent RNA helicase DED1 OS=Candida glabrata GN=DED1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.493e-28 Identity = 64/134 (47.76%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 505 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG---------ARTVYPLALILAPTRELSSQIHDEA 879 +++GINFD Y+DIPVE SGE+VP + F L L NI+ ++ KPTPVQ++++PI GRDLMACAQTGSGKT F FP++S E ++ P R +P A+++APTREL++QI DEA Sbjct: 119 QSSGINFDNYDDIPVEASGEDVPEAITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGFLFPVLS----ESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDEA 248
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_PIG (Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa GN=DDX4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.493e-28 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI +AGRDLMACAQTGSGKTAAF PI++ +M + + R P +I+APTREL +QI+ EA Sbjct: 252 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAPTRELVNQIYLEA 383
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_HUMAN (Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens GN=DDX4 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 6.493e-28 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI +AGRDLMACAQTGSGKTAAF PI++ +M + + R P +I+APTREL +QI+ EA Sbjct: 254 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIVAPTRELVNQIYLEA 385
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DED1_SCHPO (ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe GN=ded1 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.108e-27 Identity = 68/132 (51.52%), Postives = 84/132 (63.64%), Query Frame = 1 Query: 508 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS--------GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 +TGINF+ Y+DIPVE SG ++ P VN F L L NI+ Y +PTPVQ+++IPI +GRDLMACAQTGSGKTA F FPI+S + +Q R YP LILAPTREL QIH+E+ Sbjct: 145 STGINFEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEES 275
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_BOVIN (Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus GN=DDX4 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27 Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGINFD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI GRDLMACAQTGSGKTAAF PI++ +MR+ + R P +I+APTREL +QI+ EA Sbjct: 256 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIVAPTRELINQIYLEA 387
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX4_MACFA (Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis GN=DDX4 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.089e-26 Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 D + FA + TGI+FD Y+ I VE SG + PP + TF E +L + LN NI + Y K TPVQ+++IPI +AGRDLMACAQTGSGKTAAF PI++ +M + + P +I+APTREL +QI+ EA Sbjct: 255 DEDSIFAHYQ-TGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASCFKELQEPECIIVAPTRELVNQIYLEA 386
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: VASA_DROME (ATP-dependent RNA helicase vasa OS=Drosophila melanogaster GN=vas PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 3.335e-24 Identity = 58/134 (43.28%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 DA + F+ +GI+F Y +IPV+ +G +VP P+ F DL + + N+ + Y PTP+Q+ +IP+ +GRDLMACAQTGSGKTAAF PI+S ++ + P P +I++PTREL+ QI +EA Sbjct: 210 DAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLED-----PHELELGRPQVVIVSPTRELAIQIFNEA 338 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |