CK935221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNPX ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain WH8102) GN=fabZ PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.211e-33 Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKL-QKRFGIAKMEGK 840 V+ QI +LPHR+PF LVDRVI + PGVSA IKNVT+N+ F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++ + F FAGID VRFR+PV+ GD LV+ L+ L +KRFG K E K Sbjct: 15 VLTSEQIAGLLPHRYPFALVDRVIAHEPGVSATGIKNVTVNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLVIHCELLSLKRKRFGKVKAEAK 139
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: LPXZ_CHLTE (Bifunctional enzyme lpxC/fabZ OS=Chlorobium tepidum GN=lpxC/fabZ PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.075e-32 Identity = 64/127 (50.39%), Postives = 90/127 (70.87%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846 + DIN I++ILPHR+PFLL+D+++E+ V+IKNVT+N+ FF GHFP PIMPGVL++EAMAQ GG++ML + FF GIDK RFRKPV+ GDTLV+ + +++ + + + KAY Sbjct: 323 IFDINAIQNILPHRYPFLLIDKIVEFKLDEKIVSIKNVTMNEPFFQGHFPGNPIMPGVLIIEAMAQTGGIMMLNGKENIKESVVFFMGIDKARFRKPVLPGDTLVIEAVMTNMRRT--VCQFDAKAY 447
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNP2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=fabZ PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.951e-32 Identity = 67/122 (54.92%), Postives = 92/122 (75.41%), Query Frame = 1 Query: 475 INQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFF-FAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEG 837 + +I+ +LPHR+PF LVDR++EY PG AV +KN+T N+ F GH P PIMPGVLMVEAMAQVGG ++ Q + G ++FF FAGIDKVRFR+PV+ GD L+M + ++ ++ + IAKM+G Sbjct: 15 VEEIQKLLPHRYPFSLVDRILEYIPGEKAVGLKNITFNEPHFQGHIPNHPIMPGVLMVEAMAQVGGFILTQ--MPGMEDSFFAFAGIDKVRFRRPVVPGDQLIMTVEVITVKAK-RIAKMKG 133
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNPW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain WH7803) GN=fabZ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKME 834 V++ QI +LPHR+PF LVDRV+E+ PG AVAIKNVT+N+ F GHFP+RP+MPGVL+VEAMAQVGGL++ Q P++ + F FAGID VRFR+PV+ GD L + L+ L++ RFG K E Sbjct: 6 VLNAEQIMGLLPHRYPFALVDRVLEHVPGEKAVAIKNVTLNEPQFQGHFPDRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLRISCELLSLKRQRFGKVKAE 128
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CARHZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=fabZ PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.549e-31 Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGK 840 + DI +I +ILPHR+PFLLVD+++E PG AV IKNVTIN+ FF GHFP RPIMPGVL++EAMAQVG + +L E + FAGID RFRKPV+ GD +V + L+K++ G A+ GK Sbjct: 5 IKDITEIMNILPHRYPFLLVDKILEVVPGEKAVGIKNVTINEPFFQGHFPGRPIMPGVLLLEAMAQVGAVAILTDERYAGKLP-MFAGIDGARFRKPVLPGDQVVFEVELLKIKGSLGKARGSGK 128
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESDG ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfovibrio desulfuricans (strain G20) GN=fabZ PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.022e-31 Identity = 67/129 (51.94%), Postives = 92/129 (71.32%), Query Frame = 1 Query: 463 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846 +++DI QI +LPHR+PFLLVDRV++Y PG A+KNVT+N+ FF GHFP+ P+MPGVL++EA+AQ GG LV+ + + F F G+++VRFRKPV GD L + L L+ + + KMEGKAY Sbjct: 7 SILDIRQILGLLPHRYPFLLVDRVLDYTPGECITAVKNVTMNEPFFQGHFPDVPVMPGVLIMEALAQAGGILVVKSTDTSVEGKLFLFTGMERVRFRKPVYPGDRLELHCRL--LRHKLKLWKMEGKAY 133
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: LPXZ_PORGI (Bifunctional enzyme lpxC/fabZ OS=Porphyromonas gingivalis GN=lpxC/fabZ PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31 Identity = 66/127 (51.97%), Postives = 93/127 (73.23%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846 +MDIN+I+++LPHR+PFLLVD++IE P V +K+V+ N+ FFPGHFP P+MPGVL VEAMAQVGGL++L S + +F IDKV+FR+ V+ GDTLV ++ ++ + R G+A M G A+ Sbjct: 318 IMDINRIKELLPHRYPFLLVDKIIEVGPDY-IVGVKSVSGNEPFFPGHFPGEPVMPGVLQVEAMAQVGGLLVLNTLTEPSSYSTYFLMIDKVKFRRKVVPGDTLVFKLRMIS-EIRRGVANMRGLAF 442
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PROMP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fabZ PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31 Identity = 70/124 (56.45%), Postives = 97/124 (78.23%), Query Frame = 1 Query: 481 QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKMEGKAY 846 +I +LPHRFPF L+DRVIE+ PG AVA+KNVTIN+ F GHFPERP+MPGVL+VEAMAQVGG+++ Q P++ + F FAGI+ V+FR+PV+ GD LV+ L+ +++ RFG K++G+A+ Sbjct: 16 EILGLLPHRFPFALIDRVIEHVPGKKAVALKNVTINEPQFQGHFPERPLMPGVLIVEAMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRRPVVPGDQLVITCELLSIKRQRFG--KVKGEAH 135
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNS3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain CC9311) GN=fabZ PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 72/125 (57.60%), Postives = 92/125 (73.60%), Query Frame = 1 Query: 466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKL-QKRFGIAKME 834 V++ QI +LPHR+PF LVDRV+E+ PG AVA+KNVT N+ F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++ + F FAGID VRFR+PV+ GD L + L+ L +KRFG K E Sbjct: 13 VLNAEQIMGLLPHRYPFALVDRVLEHVPGERAVALKNVTFNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLRITCELLSLKRKRFGKVKAE 135
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ACAM1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acaryochloris marina (strain MBIC 11017) GN=fabZ PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 1 Query: 463 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKL-QKRFGI----AKMEGK 840 T I +I+++LPHR+PFLLVDR+I+Y AV IKNVT+N+ FF GHFP RP+MPGVL+VEAMAQVGG+V+ Q S + F F GIDKVR R+ V+ GD LV+ + L +KRF + A+++GK Sbjct: 13 TTFMIEEIQELLPHRYPFLLVDRIIDYKESERAVGIKNVTMNEEFFQGHFPGRPLMPGVLIVEAMAQVGGIVLAQLPDIPSGKLFVFTGIDKVRIRRSVVPGDQLVITAEFLSLKRKRFAMMSTKAEVDGK 143 The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bpback to top |