CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNE7 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus elongatus (strain PCC 7942) GN=fabZ PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.004e-30
Identity = 71/132 (53.79%), Postives = 97/132 (73.48%), Query Frame = 1
Query:  454 AFPTV-MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            A PT+ + +  I+ +LPHR+PF LVDR+I+Y PG  AV IKNVT N+  F GHFP RP+MPGVL+VEAMAQVGG +V L P++   +  F FAGID+VRFR+PV+ GD LV+   L+ +++R    K++G+A
Sbjct:    9 ALPTLPLAVETIQGLLPHRYPFALVDRIIDYVPGERAVGIKNVTFNEPQFQGHFPGRPLMPGVLIVEAMAQVGGVIVTLMPDM--PQGLFVFAGIDQVRFRRPVVPGDQLVLSAQLLSVKRR-RFCKIQGEA 137          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNR3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain RCC307) GN=fabZ PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.311e-30
Identity = 70/124 (56.45%), Postives = 92/124 (74.19%), Query Frame = 1
Query:  454 AFPTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFG 819
            A   +M   QI ++LPHR+PF LVDRV+E+ PG  AVAIKN+T+N+  F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++   +  F FAGID VRFR+PV+ GD L +   L+ L++ RFG
Sbjct:    7 AHSPLMSSEQIMNLLPHRYPFALVDRVLEHEPGKRAVAIKNITLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVTQMPDL--PKGLFVFAGIDGVRFRRPVVPGDQLRITCELLSLKRQRFG 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PROM2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9215) GN=fabZ PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.311e-30
Identity = 70/124 (56.45%), Postives = 97/124 (78.23%), Query Frame = 1
Query:  481 QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKMEGKAY 846
            QI  +LPHR+PF LVD+VIE+ PG  AVAIKNVTIN+  F GHFPERP+MPGVL+VE+MAQVGG+++ Q P++   +  F FAGI+ V+FRKPV+ GD L++   L+ +++ RFG  K++G+A+
Sbjct:   16 QILGLLPHRYPFALVDKVIEHIPGERAVAIKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRKPVLPGDQLIISCELLSIKRQRFG--KVKGEAH 135          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SYNP6 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.712e-30
Identity = 71/132 (53.79%), Postives = 96/132 (72.73%), Query Frame = 1
Query:  454 AFPTV-MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            A PT+ + +  I+ +LPHR+PF LVDR+I+Y PG  AV IKNVT N+  F GHFP RP+MPGVL+VEAMAQVGG +V L P++   +  F FAGID+VRFR+PV+ GD LV+   L+  ++R    K++G+A
Sbjct:    9 ALPTLPLAVETIQGLLPHRYPFALVDRIIDYVPGERAVGIKNVTFNEPQFQGHFPGRPLMPGVLIVEAMAQVGGVIVTLMPDM--PQGLFVFAGIDQVRFRRPVVPGDQLVLSAQLLSAKRR-RFCKIQGEA 137          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PROM5 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=fabZ PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.712e-30
Identity = 70/124 (56.45%), Postives = 97/124 (78.23%), Query Frame = 1
Query:  481 QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKMEGKAY 846
            +I  +LPHRFPF LVDRVIE+ PG  AVA+KNVTIN+  F GHFPERP+MPGVL+VE+MAQVGG+++ Q P++   +  F FAGI+ V+FR+PV+ GD LV+   L+ +++ RFG  K++G+A+
Sbjct:   16 EILGLLPHRFPFALVDRVIEHIPGHKAVALKNVTINEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRRPVLPGDQLVITCELLSIKRQRFG--KVKGEAH 135          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PROMM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9313) GN=fabZ PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30
Identity = 71/123 (57.72%), Postives = 92/123 (74.80%), Query Frame = 1
Query:  481 QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKMEGKA 843
            QI  +LPHR+PF LVDRV+ + PG  AVAIKNVT+N+  F GHFP RP+MPGVL+VEAMAQVGGL++ Q P++   +  F FAGID VRFR+PV+ GD L +   L+ L++ RFG  K+ G+A
Sbjct:    6 QIMGLLPHRYPFALVDRVVLHEPGQRAVAIKNVTLNEPQFQGHFPGRPLMPGVLIVEAMAQVGGLIVAQMPDL--PKGLFVFAGIDAVRFRRPVVPGDQLTISCELLSLKRQRFG--KVRGEA 124          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESVV ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=fabZ PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30
Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 1
Query:  463 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            +++DI QI  +LPHR+PFLLVDRV+EY PG    A KNVT+N+ FF GHFP  P+MPGVL++EA+AQ GG LV+   +     + F F GI+ VRFRKPV  GD L +   L+K   +  + KMEG+AY
Sbjct:    7 SILDIRQILGLLPHRYPFLLVDRVVEYVPGDYIKAYKNVTMNEPFFQGHFPGVPVMPGVLIMEALAQAGGILVVKSTDTAVEDKLFLFTGIESVRFRKPVYPGDKLELHCRLLK--HKLKLWKMEGRAY 133          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESVH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=fabZ PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30
Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 1
Query:  463 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            +++DI QI  +LPHR+PFLLVDRV+EY PG    A KNVT+N+ FF GHFP  P+MPGVL++EA+AQ GG LV+   +     + F F GI+ VRFRKPV  GD L +   L+K   +  + KMEG+AY
Sbjct:    7 SILDIRQILGLLPHRYPFLLVDRVVEYVPGDYIKAYKNVTMNEPFFQGHFPGVPVMPGVLIMEALAQAGGILVVKSTDTAVEDKLFLFTGIESVRFRKPVYPGDKLELHCRLLK--HKLKLWKMEGRAY 133          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PROM0 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Prochlorococcus marinus (strain MIT 9301) GN=fabZ PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.506e-30
Identity = 68/123 (55.28%), Postives = 95/123 (77.24%), Query Frame = 1
Query:  484 IRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK-RFGIAKMEGKAY 846
            I  +LPHR+PF LVD+VIE  PG  AVA+KNVT+N+  F GHFPERP+MPGVL+VE+MAQVGG+++ Q P++   +  F FAGI+ V+FRKPV+ GD L++   L+ +++ RFG  K++G+AY
Sbjct:   17 ILGLLPHRYPFALVDKVIENIPGERAVAVKNVTLNEPQFQGHFPERPLMPGVLIVESMAQVGGIIVTQMPDL--PKGLFVFAGINNVKFRKPVVPGDQLIISCELLSIKRQRFG--KVKGEAY 135          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESRM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfotomaculum reducens (strain MI-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29
Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            ++DIN I+ ILPHR+PFLLVDR++E   G   V IKNVT N+ FFPGHFP  P+MPGVL++EAMAQVG + +L       R    FAGIDK RFR+ V+ GDTL + + ++KL  R  I K   +AY
Sbjct:    1 MLDINAIQQILPHRYPFLLVDRILEMEEGKRVVGIKNVTANEPFFPGHFPGYPVMPGVLVIEAMAQVGAVAILSMPAYAGR-IALFAGIDKARFRRQVVPGDTLRIEVEVLKL--RGTIGKSMARAY 124          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_SYNE71.004e-3053.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNR31.311e-3056.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROM21.311e-3056.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNP61.712e-3053.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROM51.712e-3056.45(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROMM4.981e-3057.72(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESVV4.981e-3052.71(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESVH4.981e-3052.71(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PROM06.506e-3055.28(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESRM1.110e-2953.54(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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