CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ALHEH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 53/116 (45.69%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML---QPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK 810
            DIN I   LPHR+P LL+DRV+ ++     V IKNVTIN+ +F GHFP++P+MPGVL++E+MAQ  G++     Q E+GG+    +   IDK RF++PV  GD L +  +L ++ +
Sbjct:   13 DINDIMRNLPHRYPMLLIDRVVAFSKRERLVGIKNVTINEPYFAGHFPQKPVMPGVLILESMAQACGMLAFKSEQEELGGN-HIIYLVAIDKARFKRPVEPGDQLRLEASLKRVMR 127          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_RICTY ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rickettsia typhi GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGK 840
            ++ I +I D++PHR+PFLLVDRV++ +P  S   IKNVT+N+  F GHFP RP+MPGVLMVE+MAQ+  +++ +       +  F   I+  +FR+ V  GDT  M +  V  Q+R  + K   K
Sbjct:    2 IIAITEIMDLIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQFTGHFPTRPVMPGVLMVESMAQLAAILVAKSLDSTKNKEVFLMSIENTKFRRIVQPGDT--MHIHSVIDQQRANVWKFSSK 124          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_NITWN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN-FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRF----GIAKMEG 837
            +DI  I   LPHR+PFLL+DRV+      S + +KNVT N+  F GHFPERP+ PGVLM+E MAQ  G++ +    G  +    +F  IDK +FRKPV+ GD +   M  +  +K      G AK+ G
Sbjct:   10 VDIATILKTLPHRYPFLLIDRVLNIRADHSGIGVKNVTFNEPAFQGHFPERPVYPGVLMIEGMAQTAGVIGIMSVEGTEKPRAVYFLTIDKCKFRKPVMPGDIVEYHMRSIGRRKTMWWFHGDAKVNG 137          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_AGRRK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.006e-22
Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPE-VGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            DI +I  +LPHR+PFL+VDR+IE +   SA+ IKNVT N+  F GHFP  PIMPGVL++E MAQ  G +  + + +GG+    +F  ID  RFRKPV+ GD   +   +VK ++R  I K
Sbjct:   13 DIIEIMKLLPHRYPFLMVDRIIEIDSDNSAIGIKNVTANEPQFTGHFPGSPIMPGVLLIEGMAQTAGAICARKDGIGGNL--VYFMTIDNARFRKPVVPGDR--VEFHVVKQKQRGTIWK 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SULNB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Sulfurovum sp. (strain NBC37-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 53/132 (40.15%), Postives = 81/132 (61.36%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            V ++ +I+ ILPHR+PFLLVDR+     G      KNV+I++  F GHFP+ PI PGV+++E MAQ GG++  +     ++E       +F  IDK +FR PV  GD LV ++ ++K   +  I +++ KAY
Sbjct:    2 VFNVVEIQKILPHRYPFLLVDRITHLEKGSYIEGYKNVSISEPVFQGHFPDHPIYPGVMIIEGMAQAGGVLAFESMDNATQEEIANKVVYFMSIDKAKFRSPVTPGDQLVYKLNVIK--NKGAIWQLDAKAY 131          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SILPO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Silicibacter pomeroyi GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM-LQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFG--IAKMEGKA 843
            DI  I+ ILPHR+PFLLVD+V+E +   SAV IKNVT+N+  F GHFP  PIMPGV +VEAMAQ  G+++ +  ++  S    +F  ID  +FR+ V+ GD  VM+M +  L+ + G  I K  G A
Sbjct:    9 DIQLIQRILPHRYPFLLVDKVVEIDGYSSAVGIKNVTMNEPHFQGHFPGTPIMPGVTIVEAMAQTAGVMLGVGMDIIDSELLIYFMNIDNCKFRRKVVPGD--VMKMHVETLRGKMGGKIFKFRGTA 133          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_RALEJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Ralstonia eutropha (strain JMP134) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR-ENFFFAGIDKVRFRKPVIAGDTLVMRMTL 795
            +DI QI  +LPHR+P LLVDRV+E+ P      +KNVTIN+ FF GHFP +P+MPGV+++EA+AQ  GL+    ++       ++F GID  RF++ V  GD L M +T+
Sbjct:    6 IDIRQILKLLPHRYPMLLVDRVLEFEPQKRIKTLKNVTINEPFFQGHFPGQPVMPGVMILEALAQSAGLLTFGADMERKEGALYYFVGIDGARFKQVVYPGDQLHMNVTV 115          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_HELPS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Helicobacter pylori (strain Shi470) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 59/145 (40.69%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  436 IELRYQAFPTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM------LQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            +E  +Q   +   I  I  ILPHR+P LL+DRV+E       VA KN+T N++ F GHFP++PI PGVL+VE MAQ GG +         PE+  ++  +F   IDKV+FR PV  GD L   + ++K    + +  G A+++GK
Sbjct:    1 MEQNHQNLQSQFFIEHILQILPHRYPMLLIDRVVELEANKKIVAYKNITFNEDVFNGHFPDKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMT-IDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGK 144          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ANAPZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anaplasma phagocytophilum (strain HZ) GN=fabZ PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.314e-22
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            MD  Q+   LPH +PFLLVD+V E  PG   VA+KNVT N+ FF GHFP  PIMPGVL+VEA+AQ   L ++    G S    +  F  ID  RFRK V+ GD LV++ ++    +R    + + +AY
Sbjct:    3 MDHKQVMRALPHSYPFLLVDKVTECIPGECIVAVKNVTFNEPFFVGHFPGNPIMPGVLIVEALAQASMLCVVCDADGESTGDTSVLFMSIDSARFRKVVVPGDVLVLKSSV--CHRRGNSCRFDCRAY 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_RHIL3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=fabZ PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  472 DINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGD 771
            DI +I  +LPHR+PFL+VD++IE +   +A+ IKNVT+N+  F GHFPE PIMPGVL++E MAQ  G +  + + G      +F  I+  RFRKPV+ GD
Sbjct:   13 DIIEIMKLLPHRYPFLMVDKIIEIDGDNTAIGIKNVTVNEPHFTGHFPESPIMPGVLLIEGMAQTAGAICAKKD-GQPGNLVYFMTIENARFRKPVVPGD 111          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_ALHEH7.703e-2345.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RICTY1.006e-2243.20(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_NITWN1.006e-2243.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AGRRK1.006e-2248.33(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SULNB1.314e-2240.15(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SILPO1.314e-2248.03(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RALEJ1.314e-2247.27(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_HELPS1.314e-2240.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ANAPZ1.314e-2246.09(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_RHIL31.716e-2250.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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