CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_CLOBK ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Clostridium botulinum (strain Okra / Type B1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.227e-28
Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENF-----FFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            +DIN+I+ I+PHR+PFLLVD++ E   G SAV  KNVT+N+ FF GHFPE P+MPGVL++EA+AQVG + +L      S+E F     +F GI+K +FRK V+ GD L + + L K++   G+ K
Sbjct:    5 LDINEIKRIIPHRYPFLLVDKITELEEGKSAVGYKNVTVNEYFFNGHFPEEPVMPGVLIIEALAQVGAVAIL------SKEEFKGKIAYFGGINKAKFRKKVVPGDELKLSIELTKIKGVAGVGK 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ANOFW ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.227e-28
Identity = 65/129 (50.39%), Postives = 88/129 (68.22%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ----KRFGIAKMEGK 840
            ++DI QI+ I+PHR+PFLLVDR++E   G  AV IKNV+ N+ FF GHFPE P+MPGVL+VEA+AQVG + ML  E    R   FF GID  RF+K V  GD L + + +++ +    K  GIA ++G+
Sbjct:    1 MLDIQQIQQIIPHRYPFLLVDRIVEVEEGKRAVGIKNVSANEQFFVGHFPEYPVMPGVLIVEALAQVGAVAMLMKEENRGR-LAFFTGIDNCRFKKQVKPGDQLRLEVEMIRFKGAIGKGKGIATVDGE 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SHEWM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 62/125 (49.60%), Postives = 87/125 (69.60%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN-FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGK 840
            MDI +I   LPHR+PFLL+DRV++Y PG +  AIKNVTIN+ FF GHFP +P+MPGVL++EAMAQ  GL+  +     S ++ ++FAGIDK RF++ V  GD L   + ++K ++  G+   E K
Sbjct:    8 MDIKEIMSFLPHRYPFLLIDRVLDYTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAYKTMKEASEDSLYYFAGIDKARFKRVVEPGDQLHFEVKMIKERRGIGVFTGEVK 132          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_METCA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Methylococcus capsulatus GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ--PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK 801
            MDI  I++ LPHR+PFLLVDRV+E  PG   +AIKNVT N+ FF GHFP  PIMPGVL++EA+AQ  GL+  +  P+V G    ++  G+DKVRF++PV+ GD L +  T ++
Sbjct:    1 MDIQAIKEFLPHRYPFLLVDRVLECEPGKRLLAIKNVTYNEPFFQGHFPRVPIMPGVLIIEALAQTTGLLASETAPDVLGKGATYYLVGLDKVRFKRPVVPGDQLRLEATYLR 113          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LISMO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria monocytogenes GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ILPHR+PFLLVDRVI    G    AIKNVT N+ FF GHFPE P+MPGVL+VEA+AQ  G+ M+Q E    +    FAGID  RF++ V+ GD L++   + ++  R  IAK + KA
Sbjct:    1 MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIG-LFAGIDGCRFKRQVVPGDQLLLEAEITRM--RGAIAKAKVKA 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LISMF ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ILPHR+PFLLVDRVI    G    AIKNVT N+ FF GHFPE P+MPGVL+VEA+AQ  G+ M+Q E    +    FAGID  RF++ V+ GD L++   + ++  R  IAK + KA
Sbjct:    1 MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIG-LFAGIDGCRFKRQVVPGDQLLLEAEITRM--RGAIAKAKVKA 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LISMC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ILPHR+PFLLVDRVI    G    AIKNVT N+ FF GHFPE P+MPGVL+VEA+AQ  G+ M+Q E    +    FAGID  RF++ V+ GD L++   + ++  R  IAK + KA
Sbjct:    1 MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIG-LFAGIDGCRFKRQVVPGDQLLLEAEITRM--RGAIAKAKVKA 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LISIN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Listeria innocua GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ILPHR+PFLLVDRVI    G    AIKNVT N+ FF GHFPE P+MPGVL+VEA+AQ  G+ M+Q E    +    FAGID  RF++ V+ GD L++   + ++  R  IAK + KA
Sbjct:    1 MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIG-LFAGIDGCRFKRQVVPGDQLLLEAEITRM--RGAIAKAKVKA 123          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COXBU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 62/130 (47.69%), Postives = 93/130 (71.54%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+D  RF++ V  GD L + + ++K+ +  G+ K EGKA
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGVDNARFKRVVEPGDQLTLEVKVLKVHR--GLWKFEGKA 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COXB2 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain CbuG_Q212) GN=fabZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.602e-28
Identity = 62/130 (47.69%), Postives = 93/130 (71.54%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            VM+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+D  RF++ V  GD L + + ++K+ +  G+ K EGKA
Sbjct:    3 VMNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGVDNARFKRVVEPGDQLTLEVKVLKVHR--GLWKFEGKA 128          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_CLOBK1.227e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ANOFW1.227e-2850.39(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHEWM1.602e-2849.60(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_METCA1.602e-2853.10(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LISMO1.602e-2850.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LISMF1.602e-2850.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LISMC1.602e-2850.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LISIN1.602e-2850.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXBU1.602e-2847.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXB21.602e-2847.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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