CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACCZ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus cereus (strain ZK / E33L) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            ++DI QI++I+PHR+PFLLVD+V+E   G  A+ IKNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML+ E    R   FFAGID  RF++ V  GD L + + + +++   G  K
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFAGIDNCRFKRQVRPGDQLRLEVEMTRVRGAIGKGK 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACC0 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus cereus (strain AH820) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            ++DI QI++I+PHR+PFLLVD+V+E   G  A+ IKNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML+ E    R   FFAGID  RF++ V  GD L + + + +++   G  K
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFAGIDNCRFKRQVRPGDQLRLEVEMTRVRGAIGKGK 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACAN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            ++DI QI++I+PHR+PFLLVD+V+E   G  A+ IKNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML+ E    R   FFAGID  RF++ V  GD L + + + +++   G  K
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFAGIDNCRFKRQVRPGDQLRLEVEMTRVRGAIGKGK 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACAC ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            ++DI QI++I+PHR+PFLLVD+V+E   G  A+ IKNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML+ E    R   FFAGID  RF++ V  GD L + + + +++   G  K
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFAGIDNCRFKRQVRPGDQLRLEVEMTRVRGAIGKGK 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACAA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus anthracis (strain A0248) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAK 828
            ++DI QI++I+PHR+PFLLVD+V+E   G  A+ IKNVT N+ FF GHFP+ P+MPGVL+VEA+AQVG + ML+ E    R   FFAGID  RF++ V  GD L + + + +++   G  K
Sbjct:    1 MLDIQQIKEIIPHRYPFLLVDKVLEVEEGKRAIGIKNVTANEEFFNGHFPDYPVMPGVLIVEALAQVGAVAMLKKEENRGR-LAFFAGIDNCRFKRQVRPGDQLRLEVEMTRVRGAIGKGK 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ACISJ ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acidovorax sp. (strain JS42) GN=fabZ PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.733e-28
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVM--LQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            MDI+QI  +LPHR+PFLLVDRV E   G   +AIKNVTIN+ FF GHFP RP+MPGVL++EA+AQ  GL+   +  E  G  + F+F GID  RF++PV  GD L++ + L ++  + GI K +G A
Sbjct:    1 MDIHQILKLLPHRYPFLLVDRVNELERGKRILAIKNVTINEPFFTGHFPARPVMPGVLILEALAQAAGLLSFDMMGEAPGDDKVFYFVGIDGARFKRPVEPGDQLILDVELDRI--KGGIYKFKGVA 125          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESVM ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.570e-28
Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGG-LVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            ++DI QI  +LPHR+PFLLVDRV EY PG      KNVT+N+ FF GHFP  P+MPGVL++EA+AQ GG LV+   +     + F F GI+ VRFRKPV  GD L +   L  L+ +  + KMEG AY
Sbjct:    8 ILDIRQILGLLPHRYPFLLVDRVTEYVPGEYIKGYKNVTMNEPFFEGHFPGVPVMPGVLIMEALAQAGGILVVKSTDTPVEDKLFLFTGIESVRFRKPVYPGDKLELHCRL--LRHKLKLWKMEGFAY 133          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COXBR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28
Identity = 61/129 (47.29%), Postives = 92/129 (71.32%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            M+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+D  RF++ V  GD L + + ++K+ +  G+ K EGKA
Sbjct:    1 MNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGVDNARFKRVVEPGDQLTLEVKVLKVHR--GLWKFEGKA 125          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COXBN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28
Identity = 61/129 (47.29%), Postives = 92/129 (71.32%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ----PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            M+I  I+  +PHR+PFLL+DRVI+     S VAIKNVT+N+ FF GHFP RP+MPGVL++E++AQ  G+++++    PE  G ++ +FFAG+D  RF++ V  GD L + + ++K+ +  G+ K EGKA
Sbjct:    1 MNITDIKKYIPHRYPFLLIDRVIKIEKDKSLVAIKNVTVNEPFFTGHFPVRPVMPGVLIIESLAQAAGILIVKSLNLPE--GHKDIYFFAGVDNARFKRVVEPGDQLTLEVKVLKVHR--GLWKFEGKA 125          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BACLD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fabZ PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.662e-28
Identity = 63/129 (48.84%), Postives = 88/129 (68.22%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ----KRFGIAKMEGK 840
            ++D  QI++I+PHR+PFLLVDRV E   G  A   KNVT+N+ FF GHFP+ P+MPGVL+VEA+AQVG + +L  E    R   FFAGID  RF+K V  GD L + + +++ +    K  G+AK++G+
Sbjct:    1 MLDAQQIKEIIPHRYPFLLVDRVTEVEEGKRAAGYKNVTVNEEFFNGHFPDYPVMPGVLIVEALAQVGAVALLMKEENRGR-LAFFAGIDSCRFKKQVKPGDQLHLELEVLRFRGSIGKGKGVAKVDGE 128          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_BACCZ2.733e-2850.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACC02.733e-2850.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAN2.733e-2850.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAC2.733e-2850.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACAA2.733e-2850.41(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ACISJ2.733e-2851.97(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESVM3.570e-2852.34(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXBR4.662e-2847.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COXBN4.662e-2847.29(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BACLD4.662e-2848.84(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
back to top