CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LEGPL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Legionella pneumophila (strain Lens) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28
Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGL---VMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            +DINQI  +LPHR+PF+LVDRVI+Y      +AIKNVTIN+NFF GHFP  PIMPGVLM+EA+AQ  G+   +  QP+ G    + +FAGID  RF++ VI GD L + + LV  ++ F   +M G+AY
Sbjct:    5 IDINQIFTLLPHRYPFILVDRVIDYKVMEYLIAIKNVTINENFFTGHFPGNPIMPGVLMLEALAQASGILANLSRQPKEGYEFLH-YFAGIDNARFKQVVIPGDQLRLEVRLVGQKRDFW--RMHGEAY 130          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_LARHH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Laribacter hongkongensis (strain HLHK9) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28
Identity = 62/130 (47.69%), Postives = 87/130 (66.92%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN---FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            V+DI  I  +LPHR+PFLLVDRV+E   G    AIKNVT N+ FF GHF + P+MPGVL++EA+AQ  G++ ++   G  R+    +FF GID  RF++ VI GDTLV  + ++++ +  GI K   KA+
Sbjct:    7 VIDIRGIMKMLPHRYPFLLVDRVLEIEEGKRIKAIKNVTANEQFFVGHFEQYPVMPGVLIIEALAQAAGILAIKTHDGEVRQENALYFFVGIDNARFKRQVIPGDTLVFEVEMLRVSR--GIGKFAAKAF 134          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BORPE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella pertussis GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            +DI  I D LPHR+P LL+DRV+E  PG S VAIKNV+IN+ FF GHFP  P+MPGVL+VEAMAQ   L     E G     G++  ++  GID  RFRKPV+ GD L + +   +L +   I K +G+A
Sbjct:    3 LDIKGIMDRLPHRYPMLLIDRVLEMVPGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGARFRKPVVPGDQLRLEVEAERLSRT--ICKYQGRA 130          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_BORBR ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bordetella bronchiseptica GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.089e-28
Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVG-----GSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            +DI  I D LPHR+P LL+DRV+E  PG S VAIKNV+IN+ FF GHFP  P+MPGVL+VEAMAQ   L     E G     G++  ++  GID  RFRKPV+ GD L + +   +L +   I K +G+A
Sbjct:    3 LDIKGIMDRLPHRYPMLLIDRVLEMVPGKSIVAIKNVSINEPFFTGHFPHHPVMPGVLIVEAMAQASALFSFTDENGGLKCDGAKTAYYLVGIDGARFRKPVVPGDQLRLEVEAERLSRT--ICKYQGRA 130          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_STAS1 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 1
Query:  463 TVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFG 819
            T+ D NQI++I+PHR PFLL+DRV+EY  G   VAIK V+ N+ FF GHFPE  +MPGVL+ EA+AQ G + +L  E    +   FFAGIDK RF+K V  GDTL + + + K++   G
Sbjct:    3 TIFDYNQIKEIIPHRQPFLLIDRVVEYEVGTRCVAIKQVSGNEPFFQGHFPEYAVMPGVLITEALAQTGAVAILNSEENKGK-LAFFAGIDKCRFKKQVTPGDTLKLEVEITKMRGPIG 120          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_PELCD ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28
Identity = 65/126 (51.59%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            ++I  I  +LPHR+PFLLVDR+ +  PG  AV IKNVTIN+ FF GH+P  PIMPGVL++EAMAQVGG V          +  +F GI+K RFR+PV  GD L +++ L  L  R G+    GKAY
Sbjct:    3 LEILDIMKLLPHRYPFLLVDRIEDLEPGKRAVGIKNVTINEPFFQGHYPGHPIMPGVLIIEAMAQVGGAVAAITAGDKDDQVPYFTGINKARFRRPVGPGDVLQLQLEL--LSSRRGLFVFSGKAY 126          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_HAEDU ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Haemophilus ducreyi GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  436 IELRYQAFPTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN--FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            IE      P V+++ +I ++LPHR+PFLLVDRV +Y  G    AIKNVT+N+  F GHFP  P+ PGVL++EAMAQ  G V+     G  RE+  ++FA ID  RF++PV+ GD LV+ +  +K  +  GI K  GKAY
Sbjct:    3 IETAENRTPKVIEVTEIMNMLPHRYPFLLVDRVTDYEEGKWLRAIKNVTVNEPCFTGHFPSSPVFPGVLILEAMAQATG-VLAVATYGKMREDELYYFAAIDNARFKRPVVPGDQLVLEVEFLKEIR--GITKFTGKAY 138          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ALKOO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Alkaliphilus oremlandii (strain OhILAs) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  469 MDIN--QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN----FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            M++N  +I+ I+PHR+PFLLVD++I+   G  AV IKNVTIN+ FF GHFP++PIMPGVL+VEAMAQV  ++ +     GS EN      F GID  +FRK V+ GD L + + +   ++  GI K EGKAY
Sbjct:    1 MNLNSIEIQKIIPHRYPFLLVDKIIDMEVGKRAVGIKNVTINEPFFQGHFPDQPIMPGVLIVEAMAQVAAVICM-----GSEENEGKLGVFTGIDNCKFRKQVVPGDALHIEIEMTAFRR--GIGKAEGKAY 125          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ACIBL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Acidobacteria bacterium (strain Ellin345) GN=fabZ PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28
Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            V+D+  I+ ILPHR+P LL+DR+IE+      VAIKNVTIN+ FF GHFP  PIMPGVL+VEA+AQ GG ++L      + +   FAGI+K +FRKPV+ GD   +R+ +  +  R   AK+ GKA+
Sbjct:    7 VLDVTDIQKILPHRYPLLLLDRIIEFKRKERIVAIKNVTINEQFFQGHFPGYPIMPGVLIVEAIAQAGGALLLTEIPDQNEKLMVFAGIEKAKFRKPVVPGDQ--VRLEVDVIVWRNTAAKLMGKAF 131          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_THETN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermoanaerobacter tengcongensis GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 65/125 (52.00%), Postives = 85/125 (68.00%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            M+   IR ILPHR+PFLLVDR+IE   G  AV IKNVT N+ FF GHFP+ PIMPGVL+VEA+AQV G+ ++  E    +    FAGIDK RF+K V  GD L++ +++  +  R G+ K +G A
Sbjct:    1 MENKDIRKILPHRYPFLLVDRIIELEEGKRAVGIKNVTSNEPFFQGHFPDNPIMPGVLIVEALAQVAGIAVMNVEEFKGKLG-LFAGIDKCRFKKVVRPGDQLILEVSIDSI--RMGLVKAKGVA 122          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_LEGPL6.089e-2852.71(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LARHH6.089e-2847.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BORPE6.089e-2850.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_BORBR6.089e-2850.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STAS17.953e-2851.26(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_PELCD7.953e-2851.59(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_HAEDU7.953e-2847.48(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ALKOO7.953e-2850.76(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ACIBL7.953e-2850.39(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THETN1.039e-2752.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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