CK935221

Overview
NameCK935221
Unique NameCK935221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1779 contig Csv1_Contig1779:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ROSCS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ-PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQ----KRFGIAKMEGK 840
            +++I +I  I+PHR+PFLL+DR++E  PG  AV  K VTIN+ FF GHFP  PIMPGVL+VEA+AQ G +  L  PE  G  +  FFAGID VRFRKPV  GDTL + +   K++    K  G+A ++G+
Sbjct:    1 MLNIQEIMAIIPHRYPFLLIDRILELEPGQRAVGEKLVTINEPFFQGHFPAHPIMPGVLIVEALAQTGAVAALSLPENRG--KIAFFAGIDGVRFRKPVYPGDTLRLEVRFDKMRRGIGKGTGVATVDGQ 128          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_ECOHS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Escherichia coli O9:H4 (strain HS) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 62/130 (47.69%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSR--ENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQK---RF-GIAKMEGK 840
            + I +I ++LPHRFPFLLVDRV+++  G    A+KNV++N++FF GHFP +PI PGVL++EAMAQ  G++  +  VG     E ++FAGID+ RF++PV+ GD ++M +T  K ++   RF G+A ++GK
Sbjct:    8 LQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNESFFQGHFPGKPIFPGVLILEAMAQATGILAFK-SVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_DESPS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Desulfotalea psychrophila GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 65/131 (49.62%), Postives = 89/131 (67.94%), Query Frame = 1
Query:  460 PTVMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGL--VMLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKAY 846
            P  +DI  I D+LPHR+PF++VDR++  +PG   V +KNVT N+ +F GHFP  P+MPGVLM+E +AQVG +     +P+  G ++  FFAG+DK RFRKPV  GD L+ ++ LVK +KR  I  M  K Y
Sbjct:    7 PGEIDIVGILDLLPHRYPFVMVDRILSIDPGKEIVGLKNVTFNEQYFQGHFPGEPVMPGVLMLEGLAQVGCVHAFYTEPDAVG-KKLAFFAGVDKARFRKPVRPGDQLIYKVQLVK-EKR-SIIFMSAKGY 134          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_COLP3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 60/129 (46.51%), Postives = 91/129 (70.54%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVG-GSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            +D+N+I+ ++PHR+P LLVD+VI++ PG +  AIKNVTIN+  F GHFPE  I PGVL++EA+AQ  G++  +   G G  E + FA IDK +F+KPV+ GDT+ + +  +K    + K +G A+++GK
Sbjct:    8 IDLNEIKTLIPHRYPMLLVDKVIDHEPGKTLHAIKNVTINEPVFTGHFPELAIFPGVLILEALAQATGILGFKSTEGRGDNEMYLFASIDKAKFKKPVLPGDTMHLHVEFLKERRGMWKFYGEARVDGK 136          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_AZOSB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Azoarcus sp. (strain BH72) GN=fabZ PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.039e-27
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN--FFFAGIDKVRFRKPVIAGDTLVMRMTLVK----LQKRFGIAKMEGK 840
            MDIN+I   LPHR+PFLLVDRV+E       +A+KNVT+N+ FFPGHFP  P+MPGVL+VEAMAQ   ++  +       +N   +FAGID VRF++PV+ GD L+M + + +    + K  G+A++ G+
Sbjct:    1 MDINEIVQYLPHRYPFLLVDRVLELEENKRILALKNVTMNEPFFPGHFPHHPVMPGVLIVEAMAQAAAVLSFKSMGVKPDQNSVVYFAGIDAVRFKRPVVPGDQLLMEVEITQSKRNIYKYKGVARVNGE 130          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_THERP ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  481 QIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML-QPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFG 819
            QI++I+PHR+PFLLVDR+IE   G  AV IKNVT+N+ FF GHFP  P+MPGVL++EA+AQVG + +L  P+     +  FFAGID VRF++PV  GDTL + + + K+++  G
Sbjct:    6 QIQEIIPHRYPFLLVDRIIEIEWGQRAVGIKNVTVNEPFFVGHFPGNPVMPGVLIIEALAQVGAVALLGHPQY--RDKTAFFAGIDGVRFKRPVRPGDTLRLEVQIGKVRRNIG 117          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_STRPS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Streptococcus pneumoniae (strain CGSP14) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 68/127 (53.54%), Postives = 94/127 (74.02%), Query Frame = 1
Query:  466 VMDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVML-QPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGIAKMEGKA 843
            ++DI +I++ LPHR+P LLVDRV+E +   + VAIKNVTIN+ FF GHFP+ P+MPGVL++EA+AQ  G++ L +PE  G  +  F+AG+DKV+F+K V+ GD LVM  T VK  +R  IA +E KA
Sbjct:    1 MIDIQEIKEALPHRYPMLLVDRVLEVSED-TIVAIKNVTINEPFFNGHFPQYPVMPGVLIMEALAQTAGVLELSKPENKG--KLVFYAGMDKVKFKKQVVPGDQLVMTATFVK--RRGTIAVVEAKA 122          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SHESH ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella sediminis (strain HAW-EB3) GN=fabZ PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQPEVGGSREN--FFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGI 822
            MDI +I + LPHR+PFLL+DRV++Y PG +  AIKNVTIN+ FF GHFP +P+MPGVL++EAMAQ  GL+  +       ++  ++FAGIDK RF++ V  GD L   + +VK ++  G+
Sbjct:    8 MDIKEIMNSLPHRYPFLLIDRVLDYTPGETLHAIKNVTINEPFFQGHFPIQPVMPGVLILEAMAQATGLLAYKTMEAAVTDDSLYYFAGIDKARFKRVVEPGDQLHFEVKMVKERRGIGV 127          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SHESA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella sp. (strain ANA-3) GN=fabZ PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 63/131 (48.09%), Postives = 89/131 (67.94%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLV---MLQPEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRFGI----AKMEGK 840
            MDI +I   LPHR+PFLL+DRV++Y PG S  AIKNVTIN+ FF GHFP +P+MPGVL++EAMAQ  GL+    +  +V      ++FAGID  RFR+ V  GD +   + ++K ++  G+    AK++G+
Sbjct:    8 MDITEILKYLPHRYPFLLIDRVLDYTPGESLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFKTMSDDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFEVKMIKERRGIGVFYGEAKVDGE 138          
BLAST of CK935221 vs. ExPASy Swiss-Prot
Match: FABZ_SHEPA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fabZ PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.357e-27
Identity = 62/130 (47.69%), Postives = 90/130 (69.23%), Query Frame = 1
Query:  469 MDINQIRDILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPERPIMPGVLMVEAMAQVGGLVMLQ--PEVGGSRENFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKRF----GIAKMEGK 840
            MDI +I   LPHR+PFLL+DRV+++ PG +  AIKNVTIN+ FF GHFP +P+MPGVL++EAMAQ  GL+  +   E   +   ++FAGIDK RF++ V  GD L   + ++K ++      G+AK++G+
Sbjct:    8 MDIKEILKFLPHRYPFLLIDRVLDFTPGETLHAIKNVTINEPFFQGHFPVQPVMPGVLILEAMAQATGLLAFKTMSEEPSNDALYYFAGIDKARFKRVVEPGDQLHFEVQMIKERRGIGVFTGVAKVDGE 137          
The following BLAST results are available for this feature:
BLAST of CK935221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_ROSCS1.039e-2751.54(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_ECOHS1.039e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_DESPS1.039e-2749.62(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_COLP31.039e-2746.51(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_AZOSB1.039e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THERP1.357e-2753.51(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_STRPS1.357e-2753.54(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHESH1.357e-2750.00(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHESA1.357e-2748.09(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SHEPA1.357e-2747.69(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004564_E02 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935221 ID=CK935221; Name=CK935221; organism=Citrus sinensis; type=EST; length=847bp
GGGGGCTTTACACAGTACAACTTTTGCCAACACCCAATCCCATCATTGGT
CTCTCCTACTAGTACCCATAGACTATCTCGTTAATGTCGCCGCCGACCAA
CTGTCATGGGTTTGATTTAAATGTCTATTCTTACATCTCTGCCTCATTTT
ATTAGTTAACTTATTACTCCTCAATTGAATCAATAGAATCCAATCTCTCA
GTTCTTCTCTCTTACAATGGCTACTACCCCTGCTGCTTCCTTTGCCAATT
CACTTTTATCTCTCAATTCTCATCGACCAAATCCAAATGCCTCTTCTATT
TCAAAACCCAACACTCTCTCCATCCAATTCGACAAGAAGACGAATCAACA
ACAACAGCAGCACCAACGACATGCTCGTTTCACCACATTTTGTTCTTTGG
ACGCTGAACCCAAAGATTCCATCGAAGATAGACCCATCGAACTTCGGTAC
CAGGCATTTCCTACAGTGATGGACATTAACCAGATTCGTGACATTTTGCC
ACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTATTGAATACAATCCAG
GAGTTTCAGCTGTTGCTATTAAGAATGTTACTATTAATGATAACTTCTTT
CCTGGCCATTTTCCTGAGAGGCCAATTATGCCCGGTGTTCTCATGGTTGA
GGCAATGGCACAGGTTGGTGGCTTGGTTATGCTGCAACCAGAAGTGGGAG
GCTCTCGTGAAAATTTCTTCTTTGCTGGAATTGATAAAGTAAGATTCAGG
AAACCAGTGATTGCAGGTGACACTTTGGTCATGAGAATGACACTTGTCAA
GCTACAGAAACGCTTCGGAATAGCAAAGATGGAAGGGAAAGCTTATG
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