CK935413

Overview
NameCK935413
Unique NameCK935413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3182 contig Csv1_Contig3182:340..1265. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 83/282 (29.43%), Postives = 142/282 (50.35%), Query Frame = 3
Query:   96 VQELVKNPMLV--VPPRYICPDEDSP-LNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYW--QHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQS--MRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            VQ++  + +L   +P  +I  +++ P + +       IPV+D+                  A +EWG FQ+VNHG+ +  + +++   + FF L   EK+     +   D+EG+G       E K  W D       P        +PK PP  R+  E Y++ +K L+  L+  +   L +K + L+E          M++NYYPPCP+P+  +G+  H+D S +T+L+  NEV GLQ+  +  W     +P+A IV+IGD +  ++NG Y+++ HR  V+
Sbjct:    6 VQDISSSSLLTEAIPLEFIRSEKEQPAITTFRGPTPAIPVVDLSDPDEESVRRAVVK----ASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVP-NEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVD 282          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 82/251 (32.67%), Postives = 130/251 (51.79%), Query Frame = 3
Query:  198 IPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSME--EKKKYWQHPGDV--EGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNG-----FQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            IPVID              A++   C+EWGFFQLVNHG+    LE+VKK     + L  E  E  K  Q    +  EG GQ         +DW D+F        L+  + +P  PP   +T++ Y  E++ LA  ++  M + L  +   +++ F        F   ++++YPPCP+ + V GL  H+D   + +L Q ++V GLQ+  +G+WI + PL +A ++N GD +E+++NG Y+S  HR +  S
Sbjct:    3 IPVIDFSKLDGKERAETM-ARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATS 240          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.040e-31
Identity = 73/221 (33.03%), Postives = 121/221 (54.75%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQ---SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            AC+ WGFF+LVNHG+    ++ V+K  KG +   ME++ K       V   G   V +E   LDW   F +  LPV        P L    R+ +  ++  L+ LA  L+  + + L ++   L++ F          +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  +G+WI + P+ ++ +VN+GD LE++TNG Y+S+ HR I  +
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKEL-----VASKGLEAVQAEVTDLDWESTFFLRHLPVSNISE--VPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQT 240          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.358e-31
Identity = 71/218 (32.57%), Postives = 120/218 (55.05%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQ---SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAI 914
            AC+ WGFF+LVNHG+    ++ V+K  KG +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    R+ +  ++  L+ LA  L+  + + L ++   L+  F          +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  +G+WI + P+ ++ +VN+GD LE++TNG Y+S+ HR I
Sbjct:   27 ACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPISNISE--VPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVI 237          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.774e-31
Identity = 75/222 (33.78%), Postives = 122/222 (54.95%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDN----GFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            AC+ WGFF+LVNHG+    ++ V+K  KG +   ME++ K       V   G   V +E   LDW   F +  LPV        P L    R+ +  ++  L+ LA  L+  + + L ++   L++ F       F S +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  +G+WI + P+  + +VN+GD LE++TNG Y+S+ HR I  +
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKEL-----VASKGLEAVQAEVTDLDWESTFFLRHLPVS--NICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGS-KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQT 240          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 72/222 (32.43%), Postives = 120/222 (54.05%), Query Frame = 3
Query:  258 KLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQ---SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAI 914
            K++ AC+ WGFF+LVNHG+    ++ V+K  KG +   ME++ K       +EG     V  E   +DW   F +  LP         P L    R+ +  +   L+ LA  L+  + + L ++   L+  F          +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  +G+WI + P+ ++ +VN+GD LE++TNG Y+S+ HR I
Sbjct:   23 KINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLPSS--NISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVI 237          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.026e-31
Identity = 96/300 (32.00%), Postives = 149/300 (49.67%), Query Frame = 3
Query:   78 SLLVPCVQELVKNPMLV-----VPPRYICPDEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRK------PHLFPKLPPSLRDTL-EVYSM---ELKSLAMNLISKMGKVLNIKDEE---LREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            S++V   QE+V +  ++     +P ++I P E+SP  S      ++ +ID+              +   AC+  GFF +VNHG+ +A LE+  + +  FF L + EK++  +  G+  G+  +F      KL W +  S         +       +L  KL       L EVYS    E+  L++ L+  +G+ L I  +     R FF      MR+NYYP C +P   +G  PH D ++LTIL Q + V GL++   G+W  I P P A +VN+GDT   ++N  YRS  HRA+VNS
Sbjct:    2 SMVVQQEQEVVFDAAVLSGQTEIPSQFIWPAEESP-GSVAVEELEVALIDVGAGAERSSVVRQVGE---ACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQ-DHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNS 296          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31
Identity = 72/221 (32.58%), Postives = 121/221 (54.75%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQ---SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            AC+ WGFF+ VNHG+S   ++ V+K  K  +   ME++ K       V   G   V SE   LDW   F +  LPV        P L    R  ++ ++++L+ LA  L+  + + L ++   L++ F          +++ YPPCP+PE + GL  H+D   + +L Q ++V GLQ+  + +WI + P+ ++ ++N+GD LE++TNG Y+S+ HR I  +
Sbjct:   27 ACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEM-----VATKGLECVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQT 240          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 85/271 (31.37%), Postives = 140/271 (51.66%), Query Frame = 3
Query:  129 VPPRYICPDEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVH-LRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNG-FQS----MRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQI-KNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            +P  Y    +D  L S       +P+ID+               +  AC  WG FQ+ NHGV S  L+ ++      F L ++ K K  +    V G+G A + S   K  W++ F++I  P+H  RK  L+P       + +E Y   ++ LA  L+      L +++++++    N  FQ     +++N+YP CP+P++ MGL  H+D + +TIL Q N   GLQ+ +++  W+   P+P + +VN+GD L I+TNG + S+ HRA VN
Sbjct:   27 LPDSYTWTPKDDLLFSASASDETLPLIDLSDIHVATL-------VGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQ-NNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVN 287          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 71/221 (32.13%), Postives = 120/221 (54.30%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQ---SMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            AC+ WGFF+LVNHG+    ++ V+K  KG +   ME++ K       V   G   V +E   LDW   F +  LPV        P L    R+ +  ++  L+ LA  L+  + + L ++   L++ F          +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  + +WI + P+ ++ ++N+GD LE++TNG Y+S+ HR I  +
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKEL-----VASKGLEAVQAEVTDLDWESTFFLRHLPVSNISE--VPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQT 240          
The following BLAST results are available for this feature:
BLAST of CK935413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
FLS1_ARATH1.040e-3129.43Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
ACCO_MUSAC1.040e-3132.671-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO3_PETHY1.040e-3133.031-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY1.358e-3132.571-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_TOBAC1.774e-3133.781-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_SOLLC2.317e-3132.431-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
GAOX1_ORYSJ3.026e-3132.00Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
ACCO_PEA3.952e-3132.581-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
G3OX2_ARATH5.162e-3131.37Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO4_PETHY5.162e-3132.131-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_H07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935413 ID=CK935413; Name=CK935413; organism=Citrus sinensis; type=EST; length=926bp
GGGGGTTCCAAAACCAATACAAAACTGTAGCAATCTTAAGAGGATTTGTG
GAACAAAAGATGGCCAAGATTGGAGGTTCTCTGCTTGTTCCTTGTGTTCA
AGAGTTGGTCAAGAATCCTATGTTAGTTGTCCCTCCTAGATACATTTGTC
CGGACGAAGATTCACCACTCAATTCTGATGATACTTTGATTTCACAGATA
CCAGTTATTGACATGCAGAGCTTGCTTTCTGAAGAATCAATGGATTCTGA
GTTAGCCAAGCTCGACTTCGCTTGCAAAGAATGGGGTTTTTTCCAGCTGG
TAAACCATGGAGTAAGCTCAGCATTTCTAGAGAAAGTGAAGAAAGAGGTT
AAGGGCTTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCA
TCCAGGAGATGTAGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAAC
AAAAGCTTGATTGGGCTGACATTTTCTCCATGATCACTCTTCCAGTTCAT
CTGAGGAAGCCACACTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGACAC
CTTGGAAGTTTACTCGATGGAGTTAAAATCTCTGGCCATGAACCTGATAT
CGAAAATGGGAAAAGTTTTAAATATCAAAGATGAAGAATTGAGAGAATTC
TTTGACAATGGTTTCCAATCAATGAGGATGAACTATTACCCTCCATGTCC
TCAGCCAGAAAAGGTTATGGGCCTCACCCCTCATTCTGATGGCTCTGCTC
TTACCATTCTGCTACAAATCAATGAAGTAGAAGGTCTCCAGATCAAGAAC
AATGGAAAATGGATTCCTATCACACCGCTGCCAAATGCTTTCATTGTCAA
CATCGGAGACACATTGGAGATTATGACCAATGGGACATACCGTAGCATTG
AACATCGTGCAATTGTGAACTCTATG
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