CK935413

Overview
NameCK935413
Unique NameCK935413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3182 contig Csv1_Contig3182:340..1265. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 81/254 (31.89%), Postives = 131/254 (51.57%), Query Frame = 3
Query:  198 IPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAD--IFSMITLPVHLRKPHLFPKLPPSLRD---TLEVYSMELKSLAMNLISKMGKVLNIKDEEL------REFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNG--KWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            +PV+DM+              +  A ++WG F LV HGV    L +V+  + G F L   EK +  + PGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E+++LA  L+      L +  E++      ++  +    +M +N+YP CP P++ +GL  H+D    T +LQ + V GLQ+  +G  +W+ +  +P A +VN+GD  +I+TNG + S+ HRA+VN
Sbjct:   49 VPVVDMRDPFAAEA-------VGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVN 292          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 74/222 (33.33%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYW---QHPGDVEGFGQAFVVSEEQKLDWADIFSMIT-LPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            A KE GFFQ+VNHGVS   +  ++   + FF+L   +K   +   +H  +    G  +    E+   W D   +    PV     + +P  P  LRD +E ++ + + +   L+  + + + I+ +        G   + +N+YP CP P+K +G  PH D + +T+LL    V GL++   G WI + P PNAF+VN G  LE++TNG  +SIEHRA+ NS
Sbjct:   54 AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY--WRDCLRLACPFPVD-DSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS 271          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 72/230 (31.30%), Postives = 120/230 (52.17%), Query Frame = 3
Query:  255 AKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHP--GDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSM-----RMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            A L  AC+ WGFF+L+NHG+S   + +V+   K  +    E++ K +       VE         +   LDW   F +  LP         P L    R T++ ++ EL+ LA  L+  + + L ++   L+  F  G   +     +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  + +WI + PL  + +VNIGD LE++TNG Y+S+ HR +  +
Sbjct:   24 ALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFASKTLDSVENV-------DPDNLDWESTFFLRHLPTS--NISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQT 244          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 68/226 (30.09%), Postives = 127/226 (56.19%), Query Frame = 3
Query:  255 AKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLF--PKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQS----MRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAI 914
            A ++ AC+ WGFF++VNHG+    ++  +K  K  + +SME+K         +E   +     E + +DW   F +     HL + +L+  P +    R  ++ +   L++LA +L+  + + L ++   L++ F +G +      +++ YP CP+PE + GL  H+D   + +L Q ++V GLQ+  +G WI + PL ++ ++N+GD LE++TNG Y+S+ HR +
Sbjct:   25 ALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLER-----EVEDVDWESTFYLR----HLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVF-HGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVV 240          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 80/254 (31.50%), Postives = 130/254 (51.18%), Query Frame = 3
Query:  198 IPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWAD--IFSMITLPVHLRKPHLFPKLPPSLRD---TLEVYSMELKSLAMNLISKMGKVLNIKDEEL------REFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNG--KWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            +PV+DM+              +  A ++WG F L  HGV    L +V+  + G F L   EK +  + PGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E+++LA  L+      L +  E++      ++  +    +M +N+YP CP P++ +GL  H+D    T +LQ + V GLQ+  +G  +W+ +  +P A +VN+GD  +I+TNG + S+ HRA+VN
Sbjct:   49 VPVVDMRDPCAAEA-------VALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVN 292          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.076e-28
Identity = 81/303 (26.73%), Postives = 143/303 (47.19%), Query Frame = 3
Query:   96 VQELVKNPMLVVPPRYICP-DEDSPL---------NSDDTLISQIPVIDMQXXXXXXXXXXXXAK----LDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHP--GDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLIS--KMGKVLNIKDEELREFF----------DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            V+ L  + +  +PP Y+ P DE + L         +++D    +IPV+D+              +    +  A  +WG   +  HG+ +  +++++     FF L +++K+ Y   P  G ++G+G     +   + +W D    +  P  L    L+P  PP        +    + LA  L++   MG +   + + L +            D+    +++NYYP CPQPE  +G+  H+D SAL+ +L  N V GLQ+ +  +W+     P   IV++GD LEI++NG Y S+ HR +VN
Sbjct:   14 VEALSLSGLSAIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILH-NGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVN 315          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28
Identity = 70/250 (28.00%), Postives = 126/250 (50.40%), Query Frame = 3
Query:  189 ISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFF---DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923
            I   P+IDM+               ++  AC  WGFFQ+VNH +S   ++KV++  K  +    E+K K       V+  G     S+   +DW   F +   P         P L    R  ++ ++ +++ L+  L+  + + L ++   L+  F   +      +++ YPPCP+P+ + GL  H+D   + +L Q ++V GLQ+  +G W+ + P+ ++ +VN+GD LE++TNG Y+S+ HR I  +
Sbjct:    4 IVNFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFKDM-----VQTKGLVSAESQVNDIDWESTFYLRHRPTSNISE--VPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQT 246          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28
Identity = 81/268 (30.22%), Postives = 133/268 (49.63%), Query Frame = 3
Query:  129 VPPRYICP-DEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEG---FGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            +P  ++ P D   P  +D +L    P+IDM             A LD   KE+GF Q+VNHG+S   L ++      FF++  E+K +++            G AF    E+   W D+  ++  P+       +P  P  LR+ +  Y+   + +AM ++  + + L ++ +        G   + +NYYPP P P + +GL PH D   +T+LL    V GL+I   G WI + P+PN+ ++N G  LE++TNG  +++EHRA  N
Sbjct:   15 IPDSFLLPADRLHPATTDVSL----PIIDMSRGRDEVRQ----AILDSG-KEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP-GAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATN 269          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.836e-28
Identity = 75/229 (32.75%), Postives = 118/229 (51.53%), Query Frame = 3
Query:  270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFF--------DNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKN----NGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            AC+EWG F + +HGVS + L  V  ++K  F+L M  K    + P +  G+G   +     KL W++ FS++   +      L+P       + +E Y   +  L+  LIS +   L +  E+L            D+    +++N YP CP P   MGL PH+D S LTIL Q N + GL+I++      +WI + P+  + +V +GD   I++NG +RS  HRA+VN
Sbjct:   64 ACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGN-IPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVN 291          
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.398e-28
Identity = 80/272 (29.41%), Postives = 140/272 (51.47%), Query Frame = 3
Query:  153 DEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGF-------GQAFV----VSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRM---NYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQ--IKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920
            ++D P+ +D      +P+ID+Q             ++  AC+++G FQ++NHG     + +  +  K FF L  EEK+K+ +  G+   F        + +V    +S E+ L W D  +    P+     + +P+ P   R+ +  YS+E++ L M ++  + + L +K      +FDN    ++M   NYYPPCP P   +G   H DG+ +T+L Q  ++ GLQ  I  +  WI + P+P AF+VN+G TL+++TN  +    HR + +
Sbjct:   26 EKDVPVGND------VPIIDLQQHHHLLVQ-----QITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKF-KPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLK----LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ--DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTD 279          
The following BLAST results are available for this feature:
BLAST of CK935413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
G3O23_WHEAT1.271e-2931.89Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
IDS3_HORVU3.699e-2933.332'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO2_DORSP3.699e-2931.301-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO1_BRAJU3.699e-2930.091-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
G3O22_WHEAT4.832e-2931.50Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
LDOX_MAIZE1.076e-2826.73Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
ACCO_DIACA1.406e-2828.00Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
IDS2_HORVU1.836e-2830.22Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3OX3_ARATH1.836e-2832.75Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
HY6H_HYONI2.398e-2829.41Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_H07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935413 ID=CK935413; Name=CK935413; organism=Citrus sinensis; type=EST; length=926bp
GGGGGTTCCAAAACCAATACAAAACTGTAGCAATCTTAAGAGGATTTGTG
GAACAAAAGATGGCCAAGATTGGAGGTTCTCTGCTTGTTCCTTGTGTTCA
AGAGTTGGTCAAGAATCCTATGTTAGTTGTCCCTCCTAGATACATTTGTC
CGGACGAAGATTCACCACTCAATTCTGATGATACTTTGATTTCACAGATA
CCAGTTATTGACATGCAGAGCTTGCTTTCTGAAGAATCAATGGATTCTGA
GTTAGCCAAGCTCGACTTCGCTTGCAAAGAATGGGGTTTTTTCCAGCTGG
TAAACCATGGAGTAAGCTCAGCATTTCTAGAGAAAGTGAAGAAAGAGGTT
AAGGGCTTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCA
TCCAGGAGATGTAGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAAC
AAAAGCTTGATTGGGCTGACATTTTCTCCATGATCACTCTTCCAGTTCAT
CTGAGGAAGCCACACTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGACAC
CTTGGAAGTTTACTCGATGGAGTTAAAATCTCTGGCCATGAACCTGATAT
CGAAAATGGGAAAAGTTTTAAATATCAAAGATGAAGAATTGAGAGAATTC
TTTGACAATGGTTTCCAATCAATGAGGATGAACTATTACCCTCCATGTCC
TCAGCCAGAAAAGGTTATGGGCCTCACCCCTCATTCTGATGGCTCTGCTC
TTACCATTCTGCTACAAATCAATGAAGTAGAAGGTCTCCAGATCAAGAAC
AATGGAAAATGGATTCCTATCACACCGCTGCCAAATGCTTTCATTGTCAA
CATCGGAGACACATTGGAGATTATGACCAATGGGACATACCGTAGCATTG
AACATCGTGCAATTGTGAACTCTATG
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