CK935413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23 Identity = 84/306 (27.45%), Postives = 135/306 (44.12%), Query Frame = 3 Query: 18 YKTVAILRGFVEQKMAKIGGSLLVPCVQELVKNPMLVVPPRYICPDEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXX-AKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVE-GFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPK---LPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920 Y + L+ F E K+ V+ LV + VP + P + + + IP ID+ AK+ A +++GFFQ +NHGV +EK+ ++ F + E +K ++ + + + E W D S + P PK LP + + YS E+ LA + + + L + L+E M + +PPCP+P + G H+D S LTILL N GLQ+ +G WI + P P A I N+GD L++++N + S+EHR + N Sbjct: 5 YDRASELKAFDEMKIG----------VKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPD-------VPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILAN 292
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.826e-23 Identity = 70/260 (26.92%), Postives = 128/260 (49.23%), Query Frame = 3 Query: 171 NSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQS---MRMNYYPPCPQ----PEKVMGLTPHSDGSALTILLQINEVEGLQIK-NNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNSM 926 N T S IP++D+ AC+++GFF+++NHG+ + +++ E FF+L EK+K P + G+G + + W + + T H L+ + R L+ Y ++++A ++ M + L I+ + + QS R+N+YP CP+ E ++G H+D ++IL + N G QI +G WI + P ++F +N+GD+L++MTNG ++S+ HR + N + Sbjct: 18 NMPITFSSSIPLVDLSKPDAKTLIVK-------ACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEK--AGPANPFGYGNKRI-GLNGDIGWIEYLLLTTNQDH--NFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISIL-RSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGI 264
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.966e-22 Identity = 64/230 (27.83%), Postives = 122/230 (53.04%), Query Frame = 3 Query: 270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPH---LFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEE-----LREFFDNGFQSMRMNYYPPCPQPEKVM---GLTPHSDGSALTILLQINEVEGLQI-KNNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923 AC+E+GFF++VNHGV + ++++E GFF L K + P + G+G + + W + + P L P +F + P R+++E Y E+K ++ ++ + + L I+ + LR+ + +R+N+YP + + M G H+D +++L + N GLQI +G W+ + P ++F +N+GD L++MTNG ++S++HR + ++ Sbjct: 48 ACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNR--AGPPEPYGYGNKRI-GPNGDVGWIEYLLLNANP-QLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRD--EKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVL-RSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADT 270
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.904e-17 Identity = 71/278 (25.54%), Postives = 124/278 (44.60%), Query Frame = 3 Query: 144 ICPDEDSPLNSDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYWQHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFF---DNGFQSMRMNYYPPCPQ-------PEKV-------MGLTPHSDGSALTILLQINEVEGLQIK-NNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923 + P S + + T IP ID+ A C+E+GFF++VNH V + ++ +E FF+ + EK++ G ++ +L++ + S + + R + P + Y +K L ++ + L + D+ ++ +R+N+YPP + P K+ +G HSD LTI L+ N V GLQI ++G WIP+ P P+ F V +GD L+++TNG + S+ HR + N+ Sbjct: 2 VVPSPTSMIRTKKTKAVGIPTIDLSLERSQLSELVVKA-----CEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSN-PISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTI-LRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNT 272
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: YQK1_SCHPO (UPF0676 protein C1494.01 OS=Schizosaccharomyces pombe GN=SPCC1494.01 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.561e-11 Identity = 56/230 (24.35%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 270 ACKEWGFFQLVNHGVSSAFLEKVKKEVKGFFNLSMEEKKKYW-----QHPGDVEGFGQAFVVSEEQKLDWADIFSMITLPVHLRKPHLFPKLPPSLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYY---PPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIK-----NNGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVN 920 ACK WGF L NHG+ +++ K FF++ +EEK+KY H G FG+ + + + D + + + P + +L P + + + L+ + L + L+ I + + + +R+ Y + E HSD ++T+L Q + GL+I+ + WI + P+ +VNI D L+ T+G RS HR ++ Sbjct: 26 ACKNWGFVSLKNHGIPLDEIDRTFKLADKFFDIPVEEKQKYLFKGGRLHSGYTGHFGEKLDMEHQSRGDLKESYDLAGFP-DPKLENLCPFIAEHMDEFLQ-FQRHCYKLTLRLLDFFAIGFGIPPDFFSKSHSSEEDVLRLLKYSIPEGVERREDDEDAGAHSDYGSITLLFQ-RDAAGLEIRPPNFVKDMDWIKVNVQPDVVLVNIADMLQFWTSGKLRSTVHRVRID 252
BLAST of CK935413 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.039e-11 Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 537 SLRDTLEVYSMELKSLAMNLISKMGKVLNIKDEELREFFDNGFQSMRMNYYPPCPQPEKVMGLTPHSDGSALTILLQINEVEGLQIKN--NGKWIPITPLPNAFIVNIGDTLEIMTNGTYRSIEHRAIVNS 923 S R L Y ++ + A +++S + + L + + EF + S+R+ YP P +G+ H+D ALT++ Q N V+GL+I + + ++ ++P P A I N+GD + I+TN Y+S HR NS Sbjct: 214 SFRKALVKYHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRYPSSPNR---LGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNS 340 The following BLAST results are available for this feature:
BLAST of CK935413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935413 ID=CK935413; Name=CK935413; organism=Citrus sinensis; type=EST; length=926bpback to top |