CK935512

Overview
NameCK935512
Unique NameCK935512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935512 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 55/188 (29.26%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  102 LGISSNSEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLVGDH 632
            + + S++ PVLD+ G ++   L Y++I +  GA G   +LG    ++  C   V + +S     G  +R +   ++    +     +N++F +  +VK C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP    S  + C K+GV  ++G RRL LV D+
Sbjct:   27 INLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDIS-TVKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCP--FSSDDQFCLKVGVVHQNGKRRLALVKDN 203          
BLAST of CK935512 vs. ExPASy Swiss-Prot
Match: API8_SOLTU (Aspartic protease inhibitor 8 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.061e-11
Identity = 61/202 (30.20%), Postives = 95/202 (47.03%), Query Frame = 3
Query:   93 QPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSTKDGVRRLLLVGDHEPALNVLF 656
            Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P           ++    P   +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV  +E  L+VLF
Sbjct:   25 QNLIDLPSESPLPKPVLDTNGKELNPDSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGGIFEDQLLNIQFNIP---TVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 217          
BLAST of CK935512 vs. ExPASy Swiss-Prot
Match: API11_SOLTU (Aspartic protease inhibitor 11 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 58/189 (30.69%), Postives = 93/189 (49.21%), Query Frame = 3
Query:  123 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSTKDGVRRLLLVGDHEPALNVLF 656
            +PVLD  G ++     Y++I +  GA G   +LG    ++  CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV  +E  L+VLF
Sbjct:    6 KPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDAPCPDGVFRYNSDVGPSGTPVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALV--NENPLDVLF 185          
The following BLAST results are available for this feature:
BLAST of CK935512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SPI5_SOLTU4.061e-1129.26Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
API8_SOLTU4.061e-1130.20Aspartic protease inhibitor 8 OS=Solanum tuberosum... [more]
API11_SOLTU9.047e-1130.69Aspartic protease inhibitor 11 OS=Solanum tuberosu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_H06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935512 ID=CK935512; Name=CK935512; organism=Citrus sinensis; type=EST; length=861bp
GGGGAACAAACAGCAGCCAGCCTTCCAGTGGCAAAAAAATGAAGACTTCA
TTGATAACAACACTCTCCTTCCTTATCCTTACCTTGGCCACGCAGCCTCT
ATTGGGCATCTCATCAAACTCTGAACCTGTCTTAGATATCATTGGCAACA
AGGTCAAATCCACCCTCGAGTATAAACTTATCCCAGTCCTAGATGGCGCC
GGTGGATTCAGCACACACCTAGGCACAAATGGACAGTGTCCCTTGGACGT
TATCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATTTAAGATTACTTC
CGTACGACAATTACAAAATTGTCAAGGTATCCACTGATGTCAACCTGAGA
TTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAACCATTGTGGAA
AGTTGATAGCTATGACGATCCATTAATTGTAACCGGCGGAAGTGAGGGCC
ACCCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGAGAAAGCTGGA
AATTTTTCATATGGTGGTGTATACAATATTGTCCATTGTCCGAGTGTCTG
TCTATCTTGTCCTAGACGCTGCAACAAAATTGGCGTTTCAACTAAGGATG
GCGTTCGACGTCTGCTTCTAGTTGGTGATCATGAACCGGCTTTGAATGTT
CTGTTTTTTCCATCAGAGGAAAGCTCAAGGCTACTTCAAGCTGCTAACGC
AATATCAAGGTTTTTTGAAGCTGCTGAAGCAATATCAATGACCGCGTAAT
GAATGAACTTAGCTGTATCATTCTAAATAATAGACCAGGCTAGTAACCTT
TTATCTCTATTACAGAATAAAAATAACACCGCCTGTGATCCTTTTGCTGT
TGTCAAAAAAA
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