CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.033e-34 Identity = 72/149 (48.32%), Postives = 103/149 (69.13%), Query Frame = 3 Query: 15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDL-KNRKWHIQGTCALKGDGLYEGLDWLASTLKEMRAAGYSSV 458 E + +PTIGFNVE V+YKN+ FT+WDVG + KLRPLW+HY+ NT +++VVDS R+RI +A E ++ + + ++++L+FANKQD+ GA++ E+ E L L L R W+IQG A G GLYEGLDWL+ +++ AAG V Sbjct: 408 EFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLS---RQLVAAGVLDV 553
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 2.301e-34 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425 + EV+ T PTIG NVE++ KN F +WD+GGQE LR W Y++NT+ +I VVDS+DRER+ K+E ++ + + +L+FANKQDMKG MT E+ + L L +K+ WHIQ CAL G+GL +GL+W+ S + Sbjct: 38 MNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.301e-34 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425 + EV+ T PTIG NVE++ KN F +WD+GGQE LR W Y++NT+ +I VVDS+DRER+ K+E ++ + + +L+FANKQDMKG MT E+ + L L +K+ WHIQ CAL G+GL +GL+W+ S + Sbjct: 38 MNEVVHTSPTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + EV+ T PTIG NVE++ N F +WD+GGQE LRP W Y+ NT+ +I VVDS DRERI ++E ++ + + +L+FANKQD+K MT E+ + L L +K+ +WHIQ CAL G+GL +GL+W+ S LK Sbjct: 38 MNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 177
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.322e-33 Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + EV+ T PTIG NVE++ N F +WD+GGQE LR W Y+ NT+ +I VVDS DRERI ++E ++ + + +L+FANKQD+KG MT E+ + L L +K+ +WHIQ CAL G+GL +GL+W+ S LK Sbjct: 38 MNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 177
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.813e-32 Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + EV+ T PTIG NVE++ N F +WD+GGQE LR W Y+ NT+ +I VVDS DRERI ++E ++ + + +L+FANKQD+K MT E+ + L L +K+ +WHIQ CAL G+GL +GL+W+ S LK Sbjct: 38 MNEVVHTSPTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 177
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.813e-32 Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + EV+ T PTIG NVE++ N F +WD+GGQE LR W Y+ NT+ +I VVDS DRERI ++E ++ + + +L+FANKQD+K MT E+ + L L +K+ +WHIQ CAL G+GL +GL+W+ S LK Sbjct: 38 MNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 177
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.396e-31 Identity = 61/143 (42.66%), Postives = 99/143 (69.23%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKEMR 437 + EV+ST+ T+G+NVE +Q+K++ T+WD+ G+E++R LW+ ++N +I+VVDS DR RI +A E ++K+ + +L+FA KQD M E+ + LGL D+K+R+W++Q T L+G G+YEGLDWL++ + E R Sbjct: 39 LNEVVSTISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLSTKIIEDR 181
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.823e-31 Identity = 62/141 (43.97%), Postives = 91/141 (64.54%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKE 431 + EV+ST PT+G N+E+ Y+N+ +WD+GGQ+ LR W Y+ NT +I V+DS DR R+ K+E ++ + S+IL++ANKQD+K AM+P E+ L L +K+ +HIQ CAL G GL GLDWL S + + Sbjct: 42 LDEVVSTTPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHINK 182
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.543e-30 Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 3 Query: 21 LSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKN-RKWHIQGTCALKGDGLYEGLDWLASTL 425 + T PTIG NVE+V Y+N+ F +WD+GGQE LR W Y+ TD +I V+DS D RI K++ +++ + + ILV ANKQD+ GAM P EV LGL L+ RKW I G CA+KG+GL E L+W+A+ L Sbjct: 43 VETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |