CK935520

Overview
NameCK935520
Unique NameCK935520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_DANRE (ADP-ribosylation factor-like protein 3 OS=Danio rerio GN=arl3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.438e-30
Identity = 59/141 (41.84%), Postives = 88/141 (62.41%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKEMR 437
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR+YF NTD LIYV+DS DR+R  +  QE   ++ +  +    +LVFANKQD+  A    E+ EGL L  +++R W IQ   AL G+G+ +G++W+  ++   R
Sbjct:   41 DITHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKSVNAKR 181          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR+YF NTD LIYV+DS DR+R  +  QE   ++ +  +    +L+FANKQD+  A    E+ EGL L  +++R W IQ   AL G+G+ +G++W+   +
Sbjct:   41 DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNWVCKNV 177          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 57/135 (42.22%), Postives = 93/135 (68.89%), Query Frame = 3
Query:   12 GEVLSTV-PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWL 413
            GE + T+ PT+GFN++ ++++     +WDVGGQ+ LR  WR+YF +TDGLI+VVDS DR+R+   ++E Q+++ +  +  + +L+FANKQD+ GA++   + E L L  +++  W IQG  A+ G+ L  G+DWL
Sbjct:   38 GEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWL 172          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.706e-29
Identity = 57/135 (42.22%), Postives = 93/135 (68.89%), Query Frame = 3
Query:   12 GEVLSTV-PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWL 413
            GE + T+ PT+GFN++ ++++     +WDVGGQ+ LR  WR+YF +TDGLI+VVDS DR+R+   ++E Q+++ +  +  + +L+FANKQD+ GA++   + E L L  +++  W IQG  A+ G+ L  G+DWL
Sbjct:   38 GEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWL 172          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29
Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR+YF NTD LIYV+DS DR+R  +  QE   ++ +  +    +L+FANKQD+  A    E+ EGL L  +++R W IQ   AL G G+ +G++W+   +
Sbjct:   41 DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNV 177          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR+YF NTD LIYV+DS DR+R  +  QE   ++++  +    +L+FANKQD+  A    E+ EGL L  +++R W IQ   AL G+G+ +G++W+   +
Sbjct:   41 DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 177          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29
Identity = 57/135 (42.22%), Postives = 93/135 (68.89%), Query Frame = 3
Query:   12 GEVLSTV-PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWL 413
            GE + T+ PT+GFN++ ++++     +WDVGGQ+ LR  WR+YF +TDGLI+VVDS DR+R+   ++E Q+++ +  +  + +L+FANKQD+ GA++   + E L L  +++  W IQG  A+ G+ L  G+DWL
Sbjct:   38 GEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWL 172          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.910e-29
Identity = 57/135 (42.22%), Postives = 92/135 (68.15%), Query Frame = 3
Query:   12 GEVLSTV-PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWL 413
            GE + T+ PT+GFN++ ++++     +WDVGGQ+ LR  WR+YF +TDGLI+VVDS DR+R+   ++E Q ++ +  +  + +L+FANKQD+ GA++   + E L L  +++  W IQG  A+ G+ L  G+DWL
Sbjct:   38 GEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWL 172          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR YF NTD LIYV+DS DR+R  +  QE   ++++  +    +LVFANKQD+  A    E+ EGL L  +++R W IQ   AL G+G+ +G++W+   +
Sbjct:   41 DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 177          
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.801e-29
Identity = 57/137 (41.61%), Postives = 87/137 (63.50%), Query Frame = 3
Query:   15 EVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425
            ++    PT GFN++ VQ +     VWD+GGQ K+RP WR+YF NTD LIYV+DS DR+R  +  QE   ++++  +    +L+FANKQD+  A    E+ EGL L  +++R W IQ   AL G+G+ +G++W+   +
Sbjct:   41 DISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRFWQIQSCSALTGEGVQDGMNWVCKNV 177          
The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
ARL3_DANRE3.438e-3041.84ADP-ribosylation factor-like protein 3 OS=Danio re... [more]
ARL3_TAEGU1.706e-2941.61ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL2_RAT1.706e-2942.22ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL2_MOUSE1.706e-2942.22ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL3_XENLA2.910e-2941.61ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_PIG2.910e-2941.61ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]
ARL2_HUMAN2.910e-2942.22ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_BOVIN2.910e-2942.22ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL3_RAT3.801e-2942.34ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL3_BOVIN3.801e-2941.61ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_G08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bp
GGGTGCACATTGGTGAAGTTTTATCTACTGTTCCTACTATTGGTTTTAAT
GTCGAGAAAGTTCAGTATAAGAATGTCATATTCACTGTTTGGGATGTTGG
CGGACAAGAGAAATTGAGGCCACTATGGAGGCATTATTTTAATAACACTG
ATGGACTGATCTATGTTGTTGACTCCTTGGACCGGGAGAGAATTGGTAAA
GCAAAGCAAGAATTTCAGGCCATTATCAAAGATCCTTTTATGCTGAACAG
TGTCATTTTGGTGTTTGCCAATAAACAGGACATGAAAGGAGCAATGACCC
CAATGGAAGTATGTGAAGGATTAGGTCTCTTTGATCTCAAGAACAGGAAA
TGGCATATTCAAGGGACTTGTGCACTTAAAGGAGATGGACTTTACGAAGG
CTTGGATTGGTTGGCTTCAACACTTAAGGAGATGAGAGCTGCTGGATACT
CTTCAGTGGGCACCTCATCATTCTAGGGATCCAGGTTTACACGAGAGGAT
TTGAGGTAGATTGAATGATGAAACTCCTGAGTCATGCGTTTACTGGAGGG
AAGTCCCGTCTGTAATCAAATTCTTTTGGGTTGTATGTATCTAAGGCCAA
TGAAGCTTTTGATAGGGTGCTTACATTTGACCGTACTTGTTTGTGTGACT
TCCTGTAATGTATATTGAAGTGAACTGGACTCGGGGTTCAATACATGTCC
TTTATCCTCCTAAGATTCAAAATATGAGTTAAATCGCACACGCACGGGCA
CAGACACGTGTGCTTACCAGTGTGGTGGTGTAGGATAATTGAATC
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