CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PORYE (Acetylglutamate kinase OS=Porphyra yezoensis GN=argB PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.624e-50
Identity = 109/183 (59.56%), Postives = 131/183 (71.58%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LSE+LP+IQ+F  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL R  I P F DG+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T RP+  ++ LGFVGEV  +D  +++ L+N+ +IPVIASVAAD+ GQSYNINADTV
Sbjct:    7 RVKVLSEALPYIQQFSSRIIVIKYGGAAMK-NQK--LKDQVISDLVFLSFIGLRPILVHGGGPEINFWLDRLKILPKFDDGVRVTDQPTMDIVEMVLVGRVNKDLVATINKQGGKSVGLSGKDGLLITPRPNGKAN-LGFVGEVQNIDTKLLKILINNNYIPVIASVAADKEGQSYNINADTV 185          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYNR3 (Acetylglutamate kinase OS=Synechococcus sp. (strain RCC307) GN=argB PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.375e-49
Identity = 103/188 (54.79%), Postives = 133/188 (70.74%), Query Frame = 2
Query:  275 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            TP   RV++LSE+LP+IQ+FRG+ +V+KYGGAAM    +++                  PV+VHGGGPEIN WL R  IEPVF++GLRVT  +TM++V MVLVGRVNK +V+ +N+ G  AVGLSG DG L  AR +     LG VG+VA+VDP+VI PL++ G+IPVI+SVA +  GQ YNINADTV
Sbjct:    9 TPDVLRVEVLSEALPYIQRFRGRRVVIKYGGAAMV---REDLRDAVFRDVALLASVGVEPVVVHGGGPEINQWLNRLSIEPVFQEGLRVTCPDTMDVVEMVLVGRVNKQIVNGLNRVGGRAVGLSGADGGLVQAR-THGDGSLGLVGDVAQVDPSVIIPLLDQGYIPVISSVAPNHEGQPYNINADTV 192          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYNS3 (Acetylglutamate kinase OS=Synechococcus sp. (strain CC9311) GN=argB PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.796e-49
Identity = 105/183 (57.38%), Postives = 133/183 (72.68%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I   FRDGLRVTDA TM++V MVLVGRVNK +V+ +N+ GA+AVGLSG DGRL  ARP  + +  G VG+VARV+P V+EPL+  G++PVI+SVAA+  G+S+NINADTV
Sbjct:    6 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELRDAVFRDIALLASVGV---QPVVVHGGGPEINTWLKRLDIRSEFRDGLRVTDAETMDVVEMVLVGRVNKQIVNGLNRLGASAVGLSGSDGRLVEARPWGDGNH-GLVGDVARVNPDVLEPLLARGYVPVISSVAANPEGESHNINADTV 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PROMA (Acetylglutamate kinase OS=Prochlorococcus marinus GN=argB PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.345e-49
Identity = 102/183 (55.74%), Postives = 131/183 (71.58%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LSE+LP+IQKF G+ IV+KYGG+AM    K++                 +PV++HGGGPEIN WL +  I+  FRDGLR+TD+NTM+IV MVL+GRVNK +V+ INK GA+AVGL G+DG+L  ARP       G VGEVARV+  VIEPL+ +G+IPVI+SVA+   G +YNINADTV
Sbjct:   25 RVSVLSEALPYIQKFAGRRIVIKYGGSAMS---KESLKEAVFRDIALLSSVGAQPVIIHGGGPEINHWLTKLEIKSEFRDGLRITDSNTMDIVEMVLIGRVNKQIVNGINKVGASAVGLCGIDGKLIEARPW-GDGSYGLVGEVARVNADVIEPLIANGYIPVISSVASSVEGINYNINADTV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_GLOVI (Acetylglutamate kinase OS=Gloeobacter violaceus GN=argB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.823e-49
Identity = 104/199 (52.26%), Postives = 136/199 (68.34%), Query Frame = 2
Query:  248 AATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSD---KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            A +  T   +PA+ RV +L+E+LP+IQ+F GKTIVVKYGGAAM    K+N                 +PV+VHGGGPEIN WL+R  I   F  GLRVTD  TME+V MVL G+VNKS+V +IN+AG +AVGL G DG +  ARP  ++     +GFVG++  V+P +I+ L+  GHIPV++SVA+DE GQ+YNINADT
Sbjct:    5 APSCFTAIISPAD-RVQVLAEALPYIQRFAGKTIVVKYGGAAMV---KENLRDLVIRDIVFLATVGIKPVVVHGGGPEINSWLERLNIPVQFVGGLRVTDKITMEVVEMVLAGKVNKSIVQMINQAGGSAVGLCGRDGSIIEARPHQSAQLQPDIGFVGDIQSVNPKLIQSLLKEGHIPVLSSVASDENGQAYNINADT 199          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYNPW (Acetylglutamate kinase OS=Synechococcus sp. (strain WH7803) GN=argB PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.287e-47
Identity = 102/183 (55.74%), Postives = 131/183 (71.58%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LSE+LP+IQ+F G+ IVVKYGGAAM   +  +                 +PV+VHGGGPEIN WLKR  I+P FR+GLRVTDA TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  AR   +    G VG+VARV+P V+EPL++ G++PVI+SVAA+  G ++NINADTV
Sbjct:   14 RVSVLSEALPYIQRFAGRRIVVKYGGAAMVHAELQSAVFRDLALLRSVGV---QPVVVHGGGPEINHWLKRLDIDPEFREGLRVTDAATMDVVEMVLVGRVNKQIVNGLNRLGARAVGLSGSDGCLVEARAWGDGSH-GLVGDVARVNPDVLEPLLDRGYVPVISSVAANAEGVAHNINADTV 192          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PORUM (Acetylglutamate kinase OS=Porphyra umbilicalis GN=argB PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.287e-47
Identity = 107/183 (58.47%), Postives = 128/183 (69.95%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LS+ +  +QKF  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL +  I P F +G+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T+RPS +   LGFVGEV  VD  ++E L+N+ +IPVIASVAAD+ GQSYNINADTV
Sbjct:    7 RVKVLSD-VTILQKFSSRIIVIKYGGAAMK-NQK--LKDHVISDLVFLSFIGLRPILVHGGGPEINFWLDQLKILPKFENGVRVTDQPTMDIVEMVLVGRVNKDLVASINKQGGKSVGLSGKDGLLITSRPS-DKPNLGFVGEVQNVDTNLLEILINNNYIPVIASVAADKQGQSYNINADTV 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PORPU (Acetylglutamate kinase OS=Porphyra purpurea GN=argB PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.287e-47
Identity = 107/183 (58.47%), Postives = 128/183 (69.95%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            RV +LS+ +  +QKF  + IV+KYGGAAMK NQK                   RP+LVHGGGPEINFWL +  I P F +G+RVTD  TM+IV MVLVGRVNK LV+ INK G  +VGLSG DG L T+RPS +   LGFVGEV  VD  ++E L+N+ +IPVIASVAAD+ GQSYNINADTV
Sbjct:    7 RVKVLSD-VTILQKFSSRIIVIKYGGAAMK-NQK--LKDHVISDLVFLSFIGLRPILVHGGGPEINFWLDQLKILPKFENGVRVTDQPTMDIVEMVLVGRVNKDLVASINKQGGKSVGLSGKDGLLITSRPS-DKPNLGFVGEVQNVDTNLLEILINNNYIPVIASVAADKQGQSYNINADTV 184          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYNJB (Acetylglutamate kinase OS=Synechococcus sp. GN=argB PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.195e-47
Identity = 105/205 (51.22%), Postives = 137/205 (66.83%), Query Frame = 2
Query:  224 KSSRSLTSAATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +++ SL+ A  +  D  T    R  IL E+LP+IQ+++G+ IV+KYGGAAM   ++                   RPVLVHGGGPEIN WL++  I   F DGLRVTDA TME+V MVLVG+VNK +V LI+ AG +AVGL G DG L  AR S    ++GFVGEV+ ++P +++ L+  G IPVI+SVAADE GQ+YNINADTV
Sbjct:    2 QTNSSLSEATGSACDPLT----RAQILIEALPYIQQYQGRVIVIKYGGAAMVHQER---RAEVLRDIVFLACVGIRPVLVHGGGPEINSWLQKLDIPFKFVDGLRVTDAATMEVVEMVLVGKVNKQIVQLISLAGGSAVGLCGRDGNLIKAR-SQGRAEIGFVGEVSSINPQLLQTLLEGGQIPVISSVAADETGQAYNINADTV 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PROMM (Acetylglutamate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=argB PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.195e-47
Identity = 109/209 (52.15%), Postives = 135/209 (64.59%), Query Frame = 2
Query:  236 SLTSAATAVTDTQTPA--------EFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            S  SAA  V   QT +          RV +LSE+LP+IQ+F G+ IV+KYGGAAM      N                  PV+VHGGGPEIN WL+R  I   FRDGLRVTDA+TM++V MVLVGRVNK +V+ +N+ GA AVGLSG DG L  ARP  +    GFVG+VARV+  V+EP++  G++PVI+SVAA   G S+NINADTV
Sbjct:    3 SAKSAAALVEPCQTNSARRLTEDDSLRVSVLSEALPYIQRFSGRRIVIKYGGAAMA---HANLQEAVFRDLALLVSVGVEPVVVHGGGPEINQWLERLEIPAQFRDGLRVTDADTMDVVEMVLVGRVNKQIVNGLNQLGAKAVGLSGSDGNLVEARPWGDGSH-GFVGDVARVNTDVLEPILAKGYVPVISSVAATVEGCSHNINADTV 207          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_PORYE1.624e-5059.56Acetylglutamate kinase OS=Porphyra yezoensis GN=ar... [more]
ARGB_SYNR31.375e-4954.79Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_SYNS31.796e-4957.38Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_PROMA2.345e-4955.74Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]
ARGB_GLOVI6.823e-4952.26Acetylglutamate kinase OS=Gloeobacter violaceus GN... [more]
ARGB_SYNPW1.287e-4755.74Acetylglutamate kinase OS=Synechococcus sp. (strai... [more]
ARGB_PORUM1.287e-4758.47Acetylglutamate kinase OS=Porphyra umbilicalis GN=... [more]
ARGB_PORPU1.287e-4758.47Acetylglutamate kinase OS=Porphyra purpurea GN=arg... [more]
ARGB_SYNJB2.195e-4751.22Acetylglutamate kinase OS=Synechococcus sp. GN=arg... [more]
ARGB_PROMM2.195e-4752.15Acetylglutamate kinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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